RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 LIX1LQ8IVB5 337 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 BEST3Q8N1M1 668 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 LNX2Q8N448 690 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 FRMD1Q8N878 549 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 MRPL43Q8N983 215 aaKnown RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 HSD17B8Q92506 261 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 OR1F2PQ96R84 312 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 MNTQ99583 582 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 CMKLR1Q99788 373 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 ADGRL4Q9HBW9 690 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SOHLH2Q9NX45 425 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SLC39A1Q9NY26 324 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 ATXN7L1Q9ULK2 861 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 A0A0C4DFX4 3053 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SPAG17Q6Q759 2223 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 KANTRA0A1W2PQU2 76 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 ACOT7O00154 380 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 CCSO14618 274 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 PLPP2O43688 288 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 AMY2AP04746 511 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SPARCP09486 303 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 CTSEP14091 401 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 NID1P14543 1247 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 GDI1P31150 447 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 S100A11P31949 105 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 RPS15AP62244 130 aaKnown RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 HTRA3P83110 453 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 DPTQ07507 201 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 POU4F2Q12837 409 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 MELKQ14680 651 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SLC36A2Q495M3 483 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 GPR139Q6DWJ6 353 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 RAB12Q6IQ22 244 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 RPL22L1Q6P5R6 122 aaKnown RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 GSG1LQ6UXU4 331 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF765Q7L2R6 523 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 PRSS42Q7Z5A4 293 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM106AQ96A25 262 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 TRIM43Q96BQ3 446 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 LINC00615Q96LM1 132 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 GPR137Q96N19 417 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 RBP7Q96R05 134 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 OR2M4Q96R27 311 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 KCNK15Q9H427 330 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 FGF22Q9HCT0 170 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 CA10Q9NS85 328 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 CENPMQ9NSP4 180 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 MRPS18AQ9NVS2 196 aaKnown RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 GRHPRQ9UBQ7 328 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 TBC1D29Q9UFV1 150 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SIGLEC7Q9Y286 467 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
CSDE1-203ENST00000358528 DOCK9Q9BZ29 2069 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 SCN5AQ14524 2016 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 RTTNQ86VV8 2226 aa6.05□□□□□ -1.44
CSDE1-203ENST00000358528 EEF1E1-BLOC1S5C9J1V9 151 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PYCARD-AS1I3L0S3 204 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 M0QYG6 137 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CDK2AP1O14519 115 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SLC25A12O75746 678 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 HLA-DQB1P01920 261 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR2T7P0C7T2 308 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 UBL4AP11441 157 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 EMDP50402 254 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MMP15P51511 669 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DLX5P56178 289 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 RAP2BP61225 183 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CBFBQ13951 182 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 GK2Q14410 553 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ITPRIPL2Q3MIP1 535 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CLLU1Q5K131 121 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM65Q6PI78 240 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DPY19L4Q7Z388 723 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SPRED2Q7Z698 418 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TAF8Q7Z7C8 310 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PRR22Q8IZ63 422 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARMC10Q8N2F6 343 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MFSD9Q8NBP5 474 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TOR1AIP2Q8NFQ8 470 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR51S1Q8NGJ8 323 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR9A4Q8NGU2 314 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR2T27Q8NH04 317 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SMIM4Q8WVI0 70 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 RAB7BQ96AH8 199 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SMIM19Q96E16 107 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TRAF4Q9BUZ4 470 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ANKRD19PQ9H560 264 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 INPP5EQ9NRR6 644 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 POMT2Q9UKY4 750 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF281Q9Y2X9 895 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 IFITM5A6NNB3 132 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 F5H0A9 414 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 H0YGG7 62 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PRAF2O60831 178 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ZIC2O95409 532 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DNASE1L1P49184 302 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARFIP1P53367 373 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARF3P61204 181 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ERVK-21P61565 698 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms