RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 HAS2Q92819 552 aa6.81□□□□□ -1.32
VPS13A-202ENST00000357409 MUL1Q969V5 352 aa6.81□□□□□ -1.32
VPS13A-202ENST00000357409 Q96M85 177 aa6.81□□□□□ -1.32
VPS13A-202ENST00000357409 EDARQ9UNE0 448 aa6.81□□□□□ -1.32
VPS13A-202ENST00000357409 YES1P07947 543 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OSMP13725 252 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 RHCEP18577 417 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 BDKRB2P30411 391 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 DAP3P51398 398 aaKnown RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 RING1Q06587 406 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 CRMP1Q14194 572 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 FGFBP1Q14512 234 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM88Q6PEY1 159 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OPN5Q6U736 354 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 USP51Q70EK9 711 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 LSRQ86X29 649 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SGPP2Q8IWX5 399 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 AKR7LQ8NHP1 331 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 LIN37Q96GY3 246 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR10A2Q9H208 303 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZCWPW2A0A1B0GU75 182 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 HMGB3O15347 200 aaKnown RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TYROBPO43914 113 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SLC43A1O75387 559 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 CRABP1P29762 137 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 MAP2K3P46734 347 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 CYB561P49447 251 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SLC5A12Q1EHB4 618 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 RNLSQ5VYX0 342 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 FRMPD2BQ6IN97 320 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 C6orf15Q6UXA7 325 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 DCXRQ7Z4W1 244 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM135Q86UB9 458 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 REEP6Q96HR9 211 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF382Q96SR6 550 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF391Q9UJN7 358 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TMED7-TICAM2A0A0A6YYA0 188 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 M0QZQ0 153 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 EIF4HQ15056 248 aaKnown RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR51A4Q8NGJ6 313 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR51A2Q8NGJ7 313 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 MRGPRX1Q96LB2 322 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TMED7Q9Y3B3 224 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 F8W036 122 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SLITRK5O94991 958 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 BMP5P22003 454 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 BLOC1S1P78537 153 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SEMA3BQ13214 749 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 WDR31Q8NA23 367 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 FUNDC2Q9BWH2 189 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ONECUT1Q9UBC0 465 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 DDCP20711 480 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 F8A1P23610 371 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ITGB7P26010 798 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR6F1Q8NGZ6 308 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ASB16Q96NS5 453 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 PHF7Q9BWX1 381 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 PCDHA9Q9Y5H5 950 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF732B4DXR9 585 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 HTR1EP28566 365 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF83P51522 516 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 PRDX1Q06830 199 aaKnown RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TUBA3CQ13748 450 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 GAMTQ14353 236 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 TUBA3EQ6PEY2 450 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 GDPD3Q7L5L3 318 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 MOB3BQ86TA1 216 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ANKLE1Q8NAG6 615 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 C9orf43Q8TAL5 461 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 MAELQ96JY0 434 aaKnown RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 UBTD1Q9HAC8 227 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 RASD1Q9Y272 281 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SLC5A10A0PJK1 596 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 FAAHO00519 579 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR7A17O14581 309 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF264O43296 627 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SIX6O95475 246 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 QDPRP09417 244 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 MEDAGQ5VYS4 303 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 NPSR1Q6W5P4 371 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 OR2T11Q8NH01 316 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 CCL17Q92583 94 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 SLC29A1Q99808 456 aa6.8□□□□□ -1.32
VPS13A-202ENST00000357409 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-202ENST00000357409 A6NHS1 94 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR6C65A6NJZ3 312 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ARPC1BO15143 372 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CREBL2O60519 120 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 AGFG2O95081 481 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 F2RL1P55085 397 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 IL13RA1P78552 427 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RPL19P84098 196 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 MICAQ29983 383 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF684Q5T5D7 378 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 FAAP20Q6NZ36 180 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RANBP10Q6VN20 620 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR10V1Q8NGI7 309 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CCDC74BQ96LY2 380 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 DEFB108AA8MXU0 73 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 HTD2P86397 168 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms