RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 VASPP50552 380 aaPredicted RBP13.8□□□□□ -0.2
CHD4-201ENST00000357008 PLCXD3Q63HM9 321 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 STEAP1BQ6NZ63 245 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 CXorf36Q9H7Y0 433 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ASIC5Q9NY37 505 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD4-201ENST00000357008 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
CHD4-201ENST00000357008 ZNF264O43296 627 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ATP1B1P05026 303 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 CLEC2LP0C7M8 214 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 FPR3P25089 353 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ISL1P61371 349 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 OXA1LQ15070 435 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 MARCH8Q5T0T0 291 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 TRABD2BA6NFA1 517 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ARGFXA6NJG6 315 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 CCR9P51686 369 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 SSTP61278 116 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 IL1F10Q8WWZ1 152 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 TAAR8Q969N4 342 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 RAB3CQ96E17 227 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 RADILQ96JH8 1075 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 PKMYT1Q99640 499 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 TMEM59Q9BXS4 323 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 FOSL1P15407 271 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 FOXK2Q01167 660 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 TNFRSF17Q02223 184 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 ZFP82Q8N141 532 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SLC41A2Q96JW4 573 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 C20orf85Q9H1P6 137 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SDHAF2Q9NX18 166 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 NPFFR2Q9Y5X5 522 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 RAB4AP20338 218 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
CHD4-201ENST00000357008 LDLRAD1Q5T700 205 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 ABHD17BQ5VST6 288 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 KIAA0907Q7Z7F0 614 aaPredicted RBP13.79□□□□□ -0.2
CHD4-201ENST00000357008 RPS19P39019 145 aaKnown RBP13.79□□□□□ -0.2
CHD4-201ENST00000357008 PCBD1P61457 104 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 FAM122BQ7Z309 247 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 LRRC46Q96FV0 321 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 LIN7BQ9HAP6 207 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 E9PI62 339 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 GALR3O60755 368 aaPredicted RBP13.79□□□□□ -0.2
CHD4-201ENST00000357008 ZNF44P15621 663 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SF3B4Q15427 424 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■□□ 18.9
CHD4-201ENST00000357008 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 COX20Q5RI15 118 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 FBXW12Q6X9E4 464 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 PRSS38A1L453 326 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SOCS6O14544 535 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 CNR1P21554 472 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 CRMP1Q14194 572 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 SLC30A7Q8NEW0 376 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 KCNG3Q8TAE7 436 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 UPRTQ96BW1 309 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 WDR76Q9H967 626 aa13.79□□□□□ -0.2
CHD4-201ENST00000357008 PAPLNO95428 1278 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 PMS2P2O95744 297 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CHRM4P08173 479 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SLC35A2P78381 396 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SLC46A2Q9BY10 475 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CEBPZOSA8MTT3 80 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MSR1P21757 451 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CCR6P51684 374 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CLDN2P57739 230 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MORN1Q5T089 497 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SCARB1Q8WTV0 552 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MSI2Q96DH6 328 aaKnown RBP13.78□□□□□ -0.2
CHD4-201ENST00000357008 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SLC25A21Q9BQT8 299 aaPredicted RBP13.78□□□□□ -0.2
CHD4-201ENST00000357008 C1orf198Q9H425 327 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 HSFX1Q9UBD0 423 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MDFIC2A0A1B0GVS7 189 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 TRAPPC2LH3BP13 241 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 GFRA2O00451 464 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 C1QBP02746 253 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 ELK1P19419 428 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 GCH1P30793 250 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 C5orf46Q6UWT4 87 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 FAM57BQ71RH2 274 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 ZNF595Q8IYB9 648 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
CHD4-201ENST00000357008 SMLR1H3BR10 107 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MAKP20794 623 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 TLE4Q04727 773 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 EBPQ15125 230 aaKnown RBP13.78□□□□□ -0.2
CHD4-201ENST00000357008 ALKAL1Q6UXT8 129 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 OR13C9Q8NGT0 318 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 TPSD1Q9BZJ3 242 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 HCFC1R1Q9NWW0 138 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CLEC2DQ9UHP7 191 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms