RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PCGF3Q3KNV8 242 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ARHGAP11BQ3KRB8 267 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 PWWP2BQ6NUJ5 590 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 NDUFAF7Q7L592 441 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM52Q8NDY8 209 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 SLC25A28Q96A46 364 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 MOAP1Q96BY2 351 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 S100A16Q96FQ6 103 aaKnown RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 RADILQ96JH8 1075 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 Q96M85 177 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 FOXN4Q96NZ1 517 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 SYNDIG1Q9H7V2 258 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.3□□□□□ -0.923e-6■■□□□ 13.8
PTPRA-203ENST00000356147 MYEF2Q9P2K5 600 aaKnown RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 DPP7Q9UHL4 492 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF230Q9UIE0 474 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 FOXJ3Q9UPW0 622 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 RNF215Q9Y6U7 377 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 OR2W5A6NFC9 320 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 H7C1C5 153 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GSTZ1O43708 216 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GMFGO60234 142 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GPANK1O95872 356 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 SERPINA3P01011 423 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 CT62P0C5K7 136 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 NID1P14543 1247 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 IFNGR1P15260 489 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 CSF2RAP15509 400 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 RAG2P55895 527 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 LCN6P62502 163 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 PPP2CBP62714 309 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 PPP2CAP67775 309 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 DUSP8Q13202 625 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ALG10BQ5I7T1 473 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 PRAMEF8Q5VWM4 474 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 PRAMEF7Q5VXH5 474 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GLB1L2Q8IW92 636 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF619Q8N2I2 560 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 C12orf76Q8N812 135 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 OR4K14Q8NGD5 310 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 OR1S1Q8NH92 325 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 TNFAIP8L1Q8WVP5 186 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 NR4A3Q92570 626 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF764Q96H86 408 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 IFT46Q9NQC8 304 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR6C68A6NDL8 312 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OGG1O15527 345 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 PTP4A3O75365 173 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 IFNA16P05015 189 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ADRA2CP18825 462 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 EFNB2P52799 333 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TAS2R20P59543 309 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 IKZF1Q13422 519 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 FAM53BQ14153 422 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ETFDHQ16134 617 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 FAM69AQ5T7M9 428 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF626Q68DY1 528 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 GSG1LQ6UXU4 331 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 MUC20Q8N307 709 aaPredicted RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR51A4Q8NGJ6 313 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 DUSP19Q8WTR2 217 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 MICU1Q9BPX6 476 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 C7orf50Q9BRJ6 194 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 EVA1AQ9H8M9 152 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 PRSS16Q9NQE7 514 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 STARD5Q9NSY2 213 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TAS2R5Q9NYW4 299 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OPN4Q9UHM6 478 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 MRTO4Q9UKD2 239 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 V9GY05 133 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 F5P12259 2224 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TBC1D3KA0A087X1G2 549 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM72A0PK05 275 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TBC1D3FA6NER0 549 aaPredicted RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TVP23AA6NH52 213 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 KCNAB3O43448 404 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 DOK2O60496 412 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 GIPP09681 153 aaPredicted RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 GABRA1P14867 456 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HSD17B2P37059 387 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 AKR1D1P51857 326 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 PGDP52209 483 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 RAP2BP61225 183 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 IRF4Q15306 451 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TBC1D3GQ6DHY5 549 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TMPRSS11FQ6ZWK6 438 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF765Q7L2R6 523 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HDDC2Q7Z4H3 204 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TMED4Q7Z7H5 227 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 BVESQ8NE79 360 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TTLQ8NG68 377 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR10G6Q8NH81 332 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 SUSD6Q92537 303 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZMAT3Q9HA38 289 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM27Q9HBJ8 222 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 EXOSC3Q9NQT5 275 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 INPP5EQ9NRR6 644 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms