RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LIMS1P48059 325 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 ADPRHL1Q8NDY3 354 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 OR4K5Q8NGD3 323 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 LIPHQ8WWY8 451 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 CCDC120Q96HB5 630 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 MOGAT1Q96PD6 335 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 FUZQ9BT04 418 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 SF3B5Q9BWJ5 86 aaKnown RBP13.88□□□□□ -0.19
TRIM13-201ENST00000356017 C20orf141Q9NUB4 165 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
TRIM13-201ENST00000356017 ERRFI1Q9UJM3 462 aaPredicted RBP13.88□□□□□ -0.19
TRIM13-201ENST00000356017 RASD1Q9Y272 281 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 NBASA2RRP1 2371 aa13.88□□□□□ -0.19
TRIM13-201ENST00000356017 IGHV3-15A0A0B4J1V0 119 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 M0R082 166 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 GPR171O14626 319 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 CLOCKO15516 846 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 OR7A10O76100 309 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-201ENST00000356017 FUT1P19526 365 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 FASP25445 335 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 LTBQ06643 244 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 PMS2P3Q13401 168 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 TBPL2Q6SJ96 375 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 CCDC103Q8IW40 242 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 TMEM99Q8N816 258 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 OR5J2Q8NH18 312 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 INTS12Q96CB8 462 aaKnown RBP13.87□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF587Q96SQ5 575 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-201ENST00000356017 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 CHST11Q9NPF2 352 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 EMC3Q9P0I2 261 aa13.87□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF629Q9UEG4 869 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-201ENST00000356017 A0A0G2JNJ9 132 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 OR10H3O60404 316 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 TIPRLO75663 272 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ASAH2BP0C7U1 165 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SAGP10523 405 aaPredicted RBP13.86□□□□□ -0.19
TRIM13-201ENST00000356017 CBLP22681 906 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 CTSSP25774 331 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 OPRM1P35372 400 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ARHGDIAP52565 204 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SLC16A1P53985 500 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SEC23BQ15437 767 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 EXOC3L2Q2M3D2 409 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 TMEM201Q5SNT2 666 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 TMPRSS11FQ6ZWK6 438 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 FAM214BQ7L5A3 538 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 LSRQ86X29 649 aaPredicted RBP13.86□□□□□ -0.19
TRIM13-201ENST00000356017 GCNT2Q8N0V5 402 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 OR4C15Q8NGM1 316 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ASB5Q8WWX0 329 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 PYDC1Q8WXC3 89 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 PSD2Q9BQI7 771 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 BDH2Q9BUT1 245 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SFXN3Q9BWM7 321 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 KLHL13Q9P2N7 655 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 Q9UFV3 132 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 EMC9Q9Y3B6 208 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 U3KQV3 271 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 IGKV3D-15A0A087WSY6 115 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 LOC102725191A0A1B0GVB3 256 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF724A8MTY0 619 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 LRRN3E7EW58 273 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SS18L1O75177 396 aaPredicted RBP13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ENTPD5O75356 428 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 E2F6O75461 281 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 CCNB2O95067 398 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 OR6A2O95222 327 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 IL18BPO95998 194 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 LDLRP01130 860 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 YES1P07947 543 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 AGAP20933 346 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 CHRNB4P30926 498 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 DNAJA1P31689 397 aaKnown RBP13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SLC9A3P48764 834 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SLC17A1Q14916 467 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 POU4F3Q15319 338 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 TAF11Q15544 211 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ATP6AP1Q15904 470 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 MICAQ29983 383 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 NANOGNBQ7Z5D8 188 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 GPAT4Q86UL3 456 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 STMN2Q93045 179 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 RNF6Q9Y252 685 aa13.86□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF716A6NP11 495 aa13.85□□□□□ -0.19
TRIM13-201ENST00000356017 EFCAB9A8MZ26 197 aa13.85□□□□□ -0.19
TRIM13-201ENST00000356017 ZNF814B7Z6K7 855 aa13.85□□□□□ -0.19
TRIM13-201ENST00000356017 ANKRD65E5RJM6 399 aa13.85□□□□□ -0.19
TRIM13-201ENST00000356017 PLPP3O14495 311 aa13.85□□□□□ -0.19
TRIM13-201ENST00000356017 DVL2O14641 736 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms