RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MAD2L1Q13257 205 aaPredicted RBP5.05□□□□□ -1.6
CD47-201ENST00000355354 SIGIRRQ6IA17 410 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 NIPAL1Q6NVV3 410 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 GDPD4Q6W3E5 623 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 KRT73Q86Y46 540 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 SIAH3Q8IW03 269 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 OR4A15Q8NGL6 344 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 ZNF420Q8TAQ5 688 aaPredicted RBP5.05□□□□□ -1.6
CD47-201ENST00000355354 SMPDL3BQ92485 455 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 TMEM43Q9BTV4 400 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 ADGRE3Q9BY15 652 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 NOX3Q9HBY0 568 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 P2RX2Q9UBL9 471 aa5.05□□□□□ -1.6
CD47-201ENST00000355354 H3BMH7 237 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PYCARD-AS1I3L0S3 204 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GABRPO00591 440 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 HNRNPCL1O60812 293 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 FABP3P05413 133 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 HOXD4P09016 255 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 MDKP21741 143 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 DNAJA1P31689 397 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 SPAM1P38567 509 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 BUD31P41223 144 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 OR3A3P47888 321 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 OR2B6P58173 313 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 EXOSC2Q13868 293 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 TTLL9Q3SXZ7 439 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 MRPL2Q5T653 305 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 FAAH2Q6GMR7 532 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 KLHDC8AQ8IYD2 350 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 HJURPQ8NCD3 748 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 NAXEQ8NCW5 288 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 FAM46BQ96A09 425 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 DTD2Q96FN9 168 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 COX14Q96I36 57 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SDF2Q99470 211 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ARHGAP9Q9BRR9 750 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 BHLHE41Q9C0J9 482 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 POLR2J3Q9H1A7 115 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 ZNF703Q9H7S9 590 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 ADGRL4Q9HBW9 690 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 KLHL1Q9NR64 748 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GMEB2Q9UKD1 530 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ENTPD4Q9Y227 616 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SIGLEC7Q9Y286 467 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CSAG2Q9Y5P2 127 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 A0A0A6YYD4 124 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 TRAV39A0A0B4J263 110 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 DYTNA2CJ06 578 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 A8MVJ9 347 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ZNF670-ZNF695F2Z2N8 137 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SEMA4FO95754 770 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GCGRP47871 477 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 DLX1P56177 255 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 BTN1A1Q13410 526 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C14orf28Q4W4Y0 310 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C22orf34Q6ZV56 151 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C17orf78Q8N4C9 275 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PLPP7Q8NBV4 271 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SLC37A3Q8NCC5 494 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 NICN1Q9BSH3 213 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CDCA4Q9BXL8 241 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PPCSQ9HAB8 311 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SLC7A7Q9UM01 511 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 MRPS18BQ9Y676 258 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 CDHR4A6H8M9 788 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ZNF503-AS2A6NEH8 195 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GPR31O00270 319 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 EEF1E1O43324 174 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 FBXO24O75426 580 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GP1BAP07359 652 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 NMBP08949 121 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CXCR4P61073 352 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 TNK1Q13470 666 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 RIN1Q13671 783 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CPTPQ5TA50 214 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 TTLL10Q6ZVT0 673 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 LYPD6Q86Y78 171 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C4orf36Q96KX1 117 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 BTBD1Q9H0C5 482 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PKD2L2Q9NZM6 624 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PPP4R1LQ9P1A2 415 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SEMA5BQ9P283 1151 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 NDOR1Q9UHB4 597 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 C3orf18Q9UK00 162 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ERVW-1Q9UQF0 538 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 A0A0A6YYD5 115 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 SPAARA0A1B0GVQ0 90 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 CCDC182A6NF36 153 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ADAP1O75689 374 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 GSTM1P09488 218 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ADRB3P13945 408 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 PRLHRP49683 370 aa5.04□□□□□ -1.6
CD47-201ENST00000355354 ZFP36L1Q07352 338 aaKnown RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 ATXN7L3Q14CW9 347 aaPredicted RBP5.04□□□□□ -1.6
CD47-201ENST00000355354 ATG9BQ674R7 924 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms