RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 TEX10Q9NXF1 929 aaPredicted RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 MS4A12Q9NXJ0 267 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 SLC5A10A0PJK1 596 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 OR2W5A6NFC9 320 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 PPIHO43447 177 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 TNFRSF6BO95407 300 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 NSA2O95478 260 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 OR8U8P0C7N1 319 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 ARAFP10398 606 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 ITPKAP23677 461 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 IMPA1P29218 277 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 CD70P32970 193 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 EPHA4P54764 986 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 GAS1P54826 345 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 TRA2AQ13595 282 aaKnown RBP eCLIP9.99□□□□□ -0.81
SND1-201ENST00000354725 SF1Q15637 639 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 ARHGAP15Q53QZ3 475 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 SFRP5Q5T4F7 317 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 HENMT1Q5T8I9 393 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 SLCO4C1Q6ZQN7 724 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 SYT14Q8NB59 555 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 OR5T3Q8NGG3 340 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 OR2T35Q8NGX2 323 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 AMDHD1Q96NU7 426 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 KXD1Q9BQD3 176 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 ADAT1Q9BUB4 502 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 ZCCHC3Q9NUD5 404 aaKnown RBP9.99□□□□□ -0.81
SND1-201ENST00000354725 HIF1ANQ9NWT6 349 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 GULP1Q9UBP9 304 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 CAMK2AQ9UQM7 478 aa9.99□□□□□ -0.81
SND1-201ENST00000354725 A0A1W2PQL4 384 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 UPK3BL1B0FP48 263 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 UPK3BL2E5RIL1 263 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 PEPDP12955 493 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 THBS2P35442 1172 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 CD96P40200 585 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 PNLIPRP1P54315 467 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 B3GNTL1Q67FW5 361 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 FAM71E1Q6IPT2 247 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 BAIAP2L2Q6UXY1 529 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 LINC00346Q8IVM7 164 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 OR5J2Q8NH18 312 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 GEMIN6Q8WXD5 167 aaKnown RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 CNOT9Q92600 299 aaKnown RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 MYNNQ9NPC7 610 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 KCNIP3Q9Y2W7 256 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ISM1B1AKI9 464 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 C6orf47O95873 294 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 IGHV2-5P01817 119 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 OPN1LWP04000 364 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 HEXAP06865 529 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 NID1P14543 1247 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 NPR2P20594 1047 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 CEACAM6P40199 344 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 SELENOVP59797 346 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 CLINT1Q14677 625 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 SLC29A4Q7RTT9 530 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 OR9Q2Q8NGE9 314 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 OTUB1Q96FW1 271 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 MGLLQ99685 303 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 TAS2R16Q9NYV7 291 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 MRPS2Q9Y399 296 aaKnown RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 FRYLO94915 3013 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 A0A0U1RQV5 110 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 TMEM202A6NGA9 273 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 TBX19O60806 448 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 PDGFBP01127 241 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 SYPP08247 313 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 LINC00614P0C842 121 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ETFAP13804 333 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 CXCL2P19875 107 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 CTSOP43234 321 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 E2F1Q01094 437 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ZNF630Q2M218 657 aaPredicted RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 SLC30A8Q8IWU4 369 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 KCNE4Q8WWG9 221 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 C22orf15Q8WYQ4 148 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 KCNJ15Q99712 375 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 WRAP53Q9BUR4 548 aaKnown RBP9.98□□□□□ -0.81
SND1-201ENST00000354725 LHX9Q9NQ69 397 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 PLEKHM1Q9Y4G2 1056 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 ENPP4Q9Y6X5 453 aa9.98□□□□□ -0.81
SND1-201ENST00000354725 J3KTA2 159 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 TPST2O60704 377 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 TNFRSF1BP20333 461 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 C5AR1P21730 350 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 AHRP35869 848 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 FRKP42685 505 aaPredicted RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 MAGEB1P43366 347 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 PPT1P50897 306 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 PKIAP61925 76 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms