RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ACOT9Q9Y305 439 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.89□□□□□ -0.831e-8■■■■□ 24
RTN3-204ENST00000354497 A0A1W2PPW3 197 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 OR7A17O14581 309 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 GATCO43716 136 aaKnown RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 SEC14L2O76054 403 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 IL33O95760 270 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 IL3P08700 152 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 MYF6P23409 242 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 SFTPDP35247 375 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 ZNF41P51814 821 aaPredicted RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 CARD18P57730 90 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 ACTG1P63261 375 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 C17orf67Q0P5P2 114 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 ZNF181Q2M3W8 571 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 TMEM44Q2T9K0 475 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 IQCCQ4KMZ1 466 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 IGSF11Q5DX21 431 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 SEZ6L2Q6UXD5 910 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 ESPNLQ6ZVH7 1005 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 C1orf52Q8N6N3 182 aaKnown RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 CDYL2Q8N8U2 506 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 GATSQ8NAP1 163 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 OR7G2Q8NG99 324 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 OR13F1Q8NGS4 319 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 HBEGFQ99075 208 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 NPAS1Q99742 590 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 PIMREGQ9BSJ6 248 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 SIRT5Q9NXA8 310 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 KLHL13Q9P2N7 655 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 ZNF221Q9UK13 617 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 MRTO4Q9UKD2 239 aaKnown RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 DIMT1Q9UNQ2 313 aaKnown RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 CAB39Q9Y376 341 aaPredicted RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 GRIP1Q9Y3R0 1128 aa9.89□□□□□ -0.83
RTN3-204ENST00000354497 TNPO3Q9Y5L0 923 aaKnown RBP9.89□□□□□ -0.83
RTN3-204ENST00000354497 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 A0A0G2JND7 137 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 CENPXA8MT69 81 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 HDAC3O15379 428 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 UTS2O95399 124 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PDYNP01213 254 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 MYL2P10916 166 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 ZNF3P17036 446 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PDLIM4P50479 330 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 ZNF83P51522 516 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 EFNA4P52798 201 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PSMD4P55036 377 aaKnown RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 RAC1P63000 192 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PSG6Q00889 435 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 CSTF3Q12996 717 aaKnown RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 RIN1Q13671 783 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 RNPS1Q15287 305 aaKnown RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 ZNHIT3Q15649 155 aaPredicted RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 ZNF239Q16600 458 aaKnown RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 FAM174BQ3ZCQ3 159 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 Q3ZCU0 254 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 CYP27C1Q4G0S4 372 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 FGD3Q5JSP0 725 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 GRTP1Q5TC63 336 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 GALNT18Q6P9A2 607 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 SHQ1Q6PI26 577 aaKnown RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PTGR2Q8N8N7 351 aaPredicted RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 SELENOMQ8WWX9 145 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 ZMYND19Q96E35 227 aaPredicted RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 RADILQ96JH8 1075 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 KLHL15Q96M94 604 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 MOGAT1Q96PD6 335 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 BBS4Q96RK4 519 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 Q9N2J8 555 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PSMC3IPQ9P2W1 217 aaPredicted RBP9.88□□□□□ -0.83
RTN3-204ENST00000354497 TBK1Q9UHD2 729 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 PRSS50Q9UI38 385 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 ATP23Q9Y6H3 246 aa9.88□□□□□ -0.83
RTN3-204ENST00000354497 TRAV6A0A075B6T7 132 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 A0A087WZY1 265 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 ATP6V1G2-DDX39BF2Z307 99 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 H7C417 338 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 J3QL48 77 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 J3QRK9 145 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 ADAMDEC1O15204 470 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 PRKD3O94806 890 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 EGR1P18146 543 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 GCAP28676 217 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 ETV4P43268 484 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 PPP5CP53041 499 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 VBP1P61758 197 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 COPZ1P61923 177 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 FAM83EQ2M2I3 478 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
RTN3-204ENST00000354497 FAM219BQ5XKK7 198 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 TMEM107Q6UX40 140 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 TMEM108Q6UXF1 575 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 B3GLCTQ6Y288 498 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 Q6ZSR9 355 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms