RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 SCDO00767 359 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 PNMTP11086 282 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 EPXP11678 715 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 SNRPBP14678 240 aaKnown RBP19.88■□□□□ 0.77
SHMT1-202ENST00000352886 ARSBP15848 533 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 CD27P26842 260 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 GRPRP30550 384 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 GRM7Q14831 915 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF74Q16587 644 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 CEP78Q5JTW2 689 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 APOOLQ6UXV4 268 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 YIPF7Q8N8F6 280 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 OR4D9Q8NGE8 314 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 OR8D2Q9GZM6 311 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 RPRD1BQ9NQG5 326 aaKnown RBP19.88■□□□□ 0.77
SHMT1-202ENST00000352886 A0A1B0GVT2 93 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 A0A1W2PR77 199 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 PSMD9O00233 223 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 UCHL1P09936 223 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 AHCYP23526 432 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 ADH7P40394 386 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 OR1D4P47884 311 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 RACK1P63244 317 aaKnown RBP19.88■□□□□ 0.77
SHMT1-202ENST00000352886 TTLL10Q6ZVT0 673 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 KRT74Q7RTS7 529 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 SLITRK4Q8IW52 837 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 ASCC1Q8N9N2 400 aaKnown RBP19.88■□□□□ 0.77
SHMT1-202ENST00000352886 CREB3L1Q96BA8 519 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.88■□□□□ 0.77
SHMT1-202ENST00000352886 NANSQ9NR45 359 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 SEC16AO15027 2179 aa19.88■□□□□ 0.77
SHMT1-202ENST00000352886 OR6C70A6NIJ9 312 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 FAM47E-STBD1D6RA91 191 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 TRIM3O75382 744 aaPredicted RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 GATBO75879 557 aaKnown RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 IL33O95760 270 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 CDKN2AP42771 156 aaKnown RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 COL19A1Q14993 1142 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 CCDC58Q4VC31 144 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 TCTE3Q8IZS6 198 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 TMEM246Q9BRR3 403 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 LMAN1LQ9HAT1 526 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 BRD7Q9NPI1 651 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 HIF3AQ9Y2N7 669 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 AK6Q9Y3D8 172 aaKnown RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 SPEGQ15772 3267 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 IDSB3KWA1 339 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF264O43296 627 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 GLCEO94923 617 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 UTS2O95399 124 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 MST1P26927 711 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 PPICP45877 212 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 SRP9P49458 86 aaKnown RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 LINC01590Q5TEZ4 76 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 MRPL48Q96GC5 212 aaKnown RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 CCNL2Q96S94 520 aaPredicted RBP19.87■□□□□ 0.77
SHMT1-202ENST00000352886 ALG12Q9BV10 488 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 ABRACLQ9P1F3 81 aa19.87■□□□□ 0.77
SHMT1-202ENST00000352886 A6NL46 340 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 TMEM150CB9EJG8 249 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 SDC3O75056 442 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 IL10RAQ13651 578 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 JAZF1Q86VZ6 243 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 TMEM151BQ8IW70 566 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.86■□□□□ 0.77
SHMT1-202ENST00000352886 TSLPQ969D9 159 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF524Q96C55 264 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 TSSK2Q96PF2 358 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 MMP25Q9NPA2 562 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 CUTCQ9NTM9 273 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF346Q9UL40 294 aaKnown RBP19.86■□□□□ 0.77
SHMT1-202ENST00000352886 CACNG2Q9Y698 323 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 METTL12A8MUP2 240 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 CPNE3O75131 537 aaKnown RBP19.86■□□□□ 0.77
SHMT1-202ENST00000352886 CD1AP06126 327 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 EGR4Q05215 589 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 BIKQ13323 160 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 HSD17B12Q53GQ0 312 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 PLA1AQ53H76 456 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ALG10Q5BKT4 473 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 FAM122BQ7Z309 247 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 C17orf82Q86X59 251 aaPredicted RBP19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ZNF511Q8NB15 262 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 SLC46A1Q96NT5 459 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 KLHDC3Q9BQ90 382 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 ZCCHC4Q9H5U6 513 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 MCUBQ9NWR8 336 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 EPHA6Q9UF33 1036 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 TEKT2Q9UIF3 430 aa19.86■□□□□ 0.77
SHMT1-202ENST00000352886 CD14P08571 375 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 CTXN1P60606 82 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 RRAS2P62070 204 aaPredicted RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 HSF2Q03933 536 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 PRR22Q8IZ63 422 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 LSM14AQ8ND56 463 aaKnown RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 ZDHHC12Q96GR4 267 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 ADOQ96SZ5 270 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 GALNT9Q9HCQ5 603 aa19.85■□□□□ 0.77
SHMT1-202ENST00000352886 EXOSC3Q9NQT5 275 aaKnown RBP19.85■□□□□ 0.77
SHMT1-202ENST00000352886 MRPS7Q9Y2R9 242 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms