RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
SMC6-201ENST00000351948 HTR5AP47898 357 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 RAB15P59190 212 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ZNF585AQ6P3V2 769 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PTOV1Q86YD1 416 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 KIAA1958Q8N8K9 716 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PIGQQ9BRB3 760 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 SLC6A5Q9Y345 797 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 A8MVM7 634 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 KLRC4-KLRK1H3BQV0 150 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 M0R082 166 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 CHP2O43745 196 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 SEC14L2O76054 403 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 BMP4P12644 408 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 TIAL1Q01085 375 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMC6-201ENST00000351948 MISPQ8IVT2 679 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 TMEM178AQ8NBL3 297 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ZNF417Q8TAU3 575 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ZNF587Q96SQ5 575 aaPredicted RBP12.61□□□□□ -0.39
SMC6-201ENST00000351948 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ACER3Q9NUN7 267 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 BABAM2Q9NXR7 383 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ZNF850A8MQ14 1090 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 SLC19A2O60779 497 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ZNF35P13682 527 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PPICP45877 212 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ART1P52961 327 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 LRRN1Q6UXK5 716 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 CCDC107Q8WV48 283 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ASB12Q8WXK4 309 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 GLS2Q9UI32 602 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 SCP2D1Q9UJQ7 156 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 OR6C70A6NIJ9 312 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 AMY2BP19961 511 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 RAE1P78406 368 aaKnown RBP12.6□□□□□ -0.39
SMC6-201ENST00000351948 NDUFA5Q16718 116 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 SLC22A6Q4U2R8 563 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 TEX19Q8NA77 164 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 OR2A5Q96R48 311 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 C14orf166Q9Y224 244 aaKnown RBP12.6□□□□□ -0.39
SMC6-201ENST00000351948 NCR1O76036 304 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 PTHP01270 115 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 ZNF582Q96NG8 517 aaPredicted RBP12.6□□□□□ -0.39
SMC6-201ENST00000351948 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 SLC43A1O75387 559 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 DBHP09172 617 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 SLC2A1P11166 492 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 ENPP1P22413 925 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 GCH1P30793 250 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 GRK5P34947 590 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 EMDP50402 254 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 RPS18P62269 152 aaKnown RBP12.6□□□□□ -0.39
SMC6-201ENST00000351948 SLC35A1P78382 337 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 UNQ6126/PRO20091Q6UXV3 157 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 VN1R4Q7Z5H5 301 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 OR1N1Q8NGS0 311 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 HSD17B8Q92506 261 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 EDN3P14138 238 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 GABREP78334 506 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 SWI5Q1ZZU3 235 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 FAM69AQ5T7M9 428 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 ABI3BPQ7Z7G0 1075 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 OR9K2Q8NGE7 335 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 MENTQ9BUN1 341 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 GALNT9Q9HCQ5 603 aa12.6□□□□□ -0.39
SMC6-201ENST00000351948 A0A0X1KG70 313 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 RFPL3O75679 317 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 SLC2A10O95528 541 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 IFNGR1P15260 489 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 P2RX1P51575 399 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ILKQ13418 452 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ZNF704Q6ZNC4 412 aaPredicted RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 ZADH2Q8N4Q0 377 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 PIGCQ92535 297 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 NUDT9Q9BW91 350 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 SHISA8B8ZZ34 492 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 DISC1C4P0D8 188 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 CFL1P23528 166 aaKnown RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 EVI2BP34910 448 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 CENPSQ8N2Z9 138 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 INMT-MINDY4F8WBC2 141 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 CD14P08571 375 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 DRD5P21918 477 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms