RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 DNASE1P24855 282 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 CDKN2AP42771 156 aaKnown RBP16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SOX2P48431 317 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 CCR9P51686 369 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 PLA2G7Q13093 441 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 Q6ZSR6 202 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 LUZP2Q86TE4 346 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 OR2T35Q8NGX2 323 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 RSC1A1Q92681 617 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 RIT1Q92963 219 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 MRGPRX1Q96LB2 322 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 C20orf85Q9H1P6 137 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 HRASLSQ9HDD0 168 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 B3GNT2Q9NY97 397 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 MEIKINA0A087WXM9 373 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 AK1P00568 194 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 TPOP07202 933 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF250P15622 560 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 C9orf50Q5SZB4 431 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SIGIRRQ6IA17 410 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SYS1Q8N2H4 156 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 METTL27Q8N6F8 245 aaPredicted RBP16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 RELTQ969Z4 430 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SORCS2Q96PQ0 1159 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 GABRG3Q99928 467 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SEC22CQ9BRL7 303 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 LIN7BQ9HAP6 207 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 KLHDC2Q9Y2U9 406 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 IFITM5A6NNB3 132 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 C2orf74A8MZ97 194 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 AQP2P41181 271 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 ODF4Q2M2E3 257 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 TOR2AQ5JU69 321 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 UNQ9370/PRO34162Q6UXP9 181 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF782Q6ZMW2 699 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 OVCH1Q7RTY7 1134 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 KANSL1Q7Z3B3 1105 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 SLITRK4Q8IW52 837 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC37A2Q8TED4 501 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 RBM18Q96H35 190 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 VSTM2LQ96N03 204 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 LMAN2LQ9H0V9 348 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 MKKSQ9NPJ1 570 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 H7C1C5 153 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 DCTN6O00399 190 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 FOXS1O43638 330 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 GMFGO60234 142 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 CSTAP01040 98 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 FCER2P06734 321 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 TMIGD3P0DMS9 266 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 OR8G3PP0DMU2 310 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 DPP4P27487 766 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 TNFRSF4P43489 277 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 LCN6P62502 163 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 ACTA2P62736 377 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 ACTG2P63267 376 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 NLRC3Q7RTR2 1065 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 GRAMD2AQ8IUY3 354 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 AVL9Q8NBF6 648 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 OR13H1Q8NG92 308 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 CEP76Q8TAP6 659 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 SUN5Q8TC36 379 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 PBX4Q9BYU1 374 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 TWSG1Q9GZX9 223 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 FBXL21Q9UKT6 434 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 OIP5O43482 229 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 HRGP04196 525 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 MAOAP21397 527 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 RAD52P43351 418 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 HACD4Q5VWC8 232 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 LEG1Q6P5S2 330 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 CCDC28AQ8IWP9 274 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 OR56B4Q8NH76 319 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 SEMA4CQ9C0C4 833 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 SRA1Q9HD15 236 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 COQ3Q9NZJ6 369 aa16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 YBX2Q9Y2T7 364 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-202ENST00000349124 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF879B4DU55 563 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 APBB3O95704 486 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 F13BP05160 661 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 CT45A8P0DMV1 189 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 CT45A9P0DMV2 189 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 STX4Q12846 297 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 CT45A2Q5DJT8 189 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 UBE2NLQ5JXB2 153 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 LINC01590Q5TEZ4 76 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 POMGNT2Q8NAT1 580 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 NKX3-1Q99801 234 aaPredicted RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 NARFLQ9H6Q4 476 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 A0A087WUJ7 227 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 ARPC1BO15143 372 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms