RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SLC7A7Q9UM01 511 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 MDC1Q14676 2089 aaKnown RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 F5H5P2 479 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 CDC42EP2O14613 210 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 SIGLEC6O43699 453 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 OR2T7P0C7T2 308 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 AKT2P31751 481 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 PYCR1P32322 319 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 TSFMP43897 325 aaKnown RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 OR12D2P58182 307 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 ZMYND11Q15326 602 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 CEBPEQ15744 281 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 FAM199XQ6PEV8 388 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 OLIG3Q7RTU3 272 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 PXT1Q8NFP0 134 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 OR2T27Q8NH04 317 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 FAM174AQ8TBP5 190 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 BMFQ96LC9 184 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 WDR92Q96MX6 357 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 INSM2Q96T92 566 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 CA10Q9NS85 328 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 ZMAT5Q9UDW3 170 aaKnown RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 PURGQ9UJV8 347 aaKnown RBP14.59□□□□□ -0.07
HMGA1-202ENST00000347617 PCOLCE2Q9UKZ9 415 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 CLEC4AQ9UMR7 237 aa14.59□□□□□ -0.07
HMGA1-202ENST00000347617 MYO10Q9HD67 2058 aa14.58□□□□□ -0.07
HMGA1-202ENST00000347617 PRSS38A1L453 326 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 FRS3O43559 492 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 OR1F1O43749 312 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 THY1P04216 161 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 NDUFS1P28331 727 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 AGTR1P30556 359 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 MAT1AQ00266 395 aaKnown RBP14.58□□□□□ -0.08
HMGA1-202ENST00000347617 FGL1Q08830 312 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 MRM1Q6IN84 353 aaKnown RBP14.58□□□□□ -0.08
HMGA1-202ENST00000347617 UQCC3Q6UW78 93 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 DNM1P46Q6ZS02 220 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 OR4C6Q8NH72 309 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 ADAMTS15Q8TE58 950 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 ZDHHC1Q8WTX9 485 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 ATOH1Q92858 354 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-202ENST00000347617 IL17FQ96PD4 163 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 OR2M4Q96R27 311 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 MED20Q9H944 212 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 SLC6A20Q9NP91 592 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 FBXL21Q9UKT6 434 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 PLCL2Q9UPR0 1127 aa14.58□□□□□ -0.08
HMGA1-202ENST00000347617 MRPS17Q9Y2R5 130 aaKnown RBP14.58□□□□□ -0.08
HMGA1-202ENST00000347617 POM121BA6NF01 834 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 TEX46H3BTG2 121 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 SEMA4FO95754 770 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 DPP4P27487 766 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 GGTLC2Q14390 218 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 RBMS2Q15434 407 aaKnown RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 LINC00303Q3SY05 128 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 PDSS1Q5T2R2 415 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ARHGAP11AQ6P4F7 1023 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 OR5J2Q8NH18 312 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 FERD3LQ96RJ6 166 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 PRSS27Q9BQR3 290 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 C1QTNF6Q9BXI9 259 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 SLC7A5P2Q9GIP4 190 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 MS4A7Q9GZW8 240 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 QRSL1Q9H0R6 528 aaKnown RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 FBXL2Q9UKC9 423 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 FOXJ3Q9UPW0 622 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 SLC6A5Q9Y345 797 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 COLEC10Q9Y6Z7 277 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 DOCK9Q9BZ29 2069 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 A0A0D9SG52 128 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF98A6NK75 572 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 IFITM5A6NNB3 132 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 H3BUI4 141 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ARPC5O15511 151 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ERAL1O75616 437 aaKnown RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 CDC123O75794 336 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 APOC3P02656 99 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 MGMTP16455 207 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 POU3F2P20265 443 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 RAB28P51157 221 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 SIRPAP78324 504 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 DUSP8Q13202 625 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 TSC22D1Q15714 1073 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ZIC1Q15915 447 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 NDUFAF6Q330K2 333 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 SFRP5Q5T4F7 317 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF660Q6AZW8 331 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 KRT77Q7Z794 578 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 HMGN2P46Q86SG4 172 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 LMNTD1Q8N9Z9 388 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 OR2L8Q8NGY9 312 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 TMEM239Q8WW34 195 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 UQCC2Q9BRT2 126 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 CHRDQ9H2X0 955 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 FGF22Q9HCT0 170 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 NTMQ9P121 344 aa14.57□□□□□ -0.08
HMGA1-202ENST00000347617 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-202ENST00000347617 KCNE3Q9Y6H6 103 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms