RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 YES1P07947 543 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 IMPDH2P12268 514 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 ATP6V1B2P21281 511 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 BMP5P22003 454 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 H3F3AP84243 136 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 EGR4Q05215 589 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 DGCR6Q14129 220 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 OTUD3Q5T2D3 398 aaPredicted RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 ZNF730Q6ZMV8 503 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 H1FNTQ75WM6 255 aaPredicted RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 FAM214BQ7L5A3 538 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 MAMDC2Q7Z304 686 aaPredicted RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 PIWIL3Q7Z3Z3 882 aaKnown RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 ZDHHC21Q8IVQ6 265 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 PIK3C3Q8NEB9 887 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 TAAR8Q969N4 342 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 C7orf34Q96L11 122 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 PIP5K1AQ99755 562 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 SF3B5Q9BWJ5 86 aaKnown RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 NMNAT1Q9HAN9 279 aaPredicted RBP10.57□□□□□ -0.72
SNCA-202ENST00000345009 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 SLC7A8Q9UHI5 535 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 RASD1Q9Y272 281 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 B3GALT5Q9Y2C3 310 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 MPDZO75970 2070 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 MED12LQ86YW9 2145 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 ARHGAP21Q5T5U3 1957 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 IGKV1D-42A0A075B6H8 117 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 A0A1W2PNV4 684 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 DHRS12A0PJE2 317 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 AQP7P3A6NL99 342 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 ZNF724A8MTY0 619 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 KDM4EB2RXH2 506 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 hCG_2039718K7EN88 272 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 SMAD9O15198 467 aaKnown RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 AKR7A3O95154 331 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 IGF2P01344 180 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 MT-ND1P03886 318 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 RAP2AP10114 183 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 NQO1P15559 274 aaKnown RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 FOXD4Q12950 439 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 TAF11Q15544 211 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 C1orf146Q5VVC0 180 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 ASRGL1Q7L266 308 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 YTHDF3Q7Z739 585 aaKnown RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 GALNT5Q7Z7M9 940 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 P3H2Q8IVL5 708 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 FAM86B1Q8N7N1 296 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 SCAIQ8N9R8 606 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 OR6K3Q8NGY3 331 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 ABHD3Q8WU67 409 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 ACOT11Q8WXI4 607 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 DNAJA3Q96EY1 480 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 RAB3IPQ96QF0 476 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 ZNF426Q9BUY5 554 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 FKRPQ9H9S5 495 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 CHST11Q9NPF2 352 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 NANSQ9NR45 359 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 KLHL13Q9P2N7 655 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 RHCGQ9UBD6 479 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 FOXD3Q9UJU5 478 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 TMCC3Q9ULS5 477 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 PROCRQ9UNN8 238 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 AURKCQ9UQB9 309 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 KLF2Q9Y5W3 355 aaPredicted RBP10.56□□□□□ -0.72
SNCA-202ENST00000345009 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
SNCA-202ENST00000345009 IGKV3D-15A0A087WSY6 115 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 IGHV3-15A0A0B4J1V0 119 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 TCRBV5S2A0A599 114 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 EEF1E1-BLOC1S5C9J1V9 151 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 J3KTA2 159 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 KPNA4O00629 521 aaPredicted RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 FFAR1O14842 300 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 EEF1E1O43324 174 aaKnown RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 SS18L1O75177 396 aaPredicted RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNCA-202ENST00000345009 GADD45GO95257 159 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 LYPD3O95274 346 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 CH25HO95992 272 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 THY1P04216 161 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 SEMG1P04279 462 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 CD8BP10966 210 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 GRPRP30550 384 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 IFNGR2P38484 337 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 PEX19P40855 299 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 SLC16A1P53985 500 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 SIRPAP78324 504 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 VLDLRP98155 873 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 IL1RL1Q01638 556 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 SRSF1Q07955 248 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNCA-202ENST00000345009 FOXF2Q12947 444 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 C1DQ13901 141 aaKnown RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 FGD3Q5JSP0 725 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 PLXDC2Q6UX71 529 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 NCCRP1Q6ZVX7 275 aaPredicted RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 GPAT4Q86UL3 456 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 NKAIN4Q8IVV8 208 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms