RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CHP2O43745 196 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM4-202ENST00000344824 LYPD3O95274 346 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 TACR3P29371 465 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 MERTKQ12866 999 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 DGCR6Q14129 220 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ELOA3BQ3SY89 546 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 OGFRL1Q5TC84 451 aaPredicted RBP12.36□□□□□ -0.43
TPM4-202ENST00000344824 ULK3Q6PHR2 472 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ZNF730Q6ZMV8 503 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ZBTB49Q6ZSB9 765 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ADGRE4PQ86SQ3 457 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 MEX3DQ86XN8 651 aaKnown RBP12.36□□□□□ -0.43
TPM4-202ENST00000344824 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 SVOPLQ8N434 492 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ELOA3Q8NG57 546 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 OR10G2Q8NGC3 310 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 FNDC9Q8TBE3 224 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 SLC7A13Q8TCU3 470 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 C9orf16Q9BUW7 83 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ENKD1Q9H0I2 346 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 KIF17Q9P2E2 1029 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ZNF629Q9UEG4 869 aaPredicted RBP12.36□□□□□ -0.43
TPM4-202ENST00000344824 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 A0A087WUU8 490 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 SH3PXD2BA1X283 911 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 FAAHO00519 579 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 CXCL13O43927 109 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 OR10H3O60404 316 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 RCBTB2O95199 551 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 PRKCAP17252 672 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 IL11P20809 199 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 SLC1A3P43003 542 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 LIMS1P48059 325 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 UGT2B15P54855 530 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■□□□□ 9.8
TPM4-202ENST00000344824 IL1RL1Q01638 556 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 TLE4Q04727 773 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 MICAQ29983 383 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 PDSS1Q5T2R2 415 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 RRM2BQ7LG56 351 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 GGNQ86UU5 652 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
TPM4-202ENST00000344824 ATG16L2Q8NAA4 619 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 DNAJA4Q8WW22 397 aaPredicted RBP12.35□□□□□ -0.43
TPM4-202ENST00000344824 TMEM234Q8WY98 164 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 ZFP3Q96NJ6 502 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 SLC29A1Q99808 456 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 KLHL4Q9C0H6 718 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 POLQO75417 2590 aa12.35□□□□□ -0.43
TPM4-202ENST00000344824 CREBBPQ92793 2442 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 TMED7-TICAM2A0A0A6YYA0 188 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 SYNGR4O95473 234 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 THRBP10828 461 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 FCGR2AP12318 317 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 POU2F1P14859 743 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 CXCR1P25024 350 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 VHLP40337 213 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 POLR2HP52434 150 aaKnown RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 HMGA2P52926 109 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 RAC1P63000 192 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 TMEM44Q2T9K0 475 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 HBMQ6B0K9 141 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 VWA1Q6PCB0 445 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 AQP11Q8NBQ7 271 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 OR4K5Q8NGD3 323 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 OR2V1Q8NHB1 315 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 ST8SIA1Q92185 356 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 GTPBP3Q969Y2 492 aaKnown RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 KLHL15Q96M94 604 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 FUZQ9BT04 418 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 VCX3BQ9H321 246 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 ANKRD19PQ9H560 264 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 OSGIN1Q9UJX0 560 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 MCTS1Q9ULC4 181 aaKnown RBP12.34□□□□□ -0.43
TPM4-202ENST00000344824 CLEC4AQ9UMR7 237 aa12.34□□□□□ -0.43
TPM4-202ENST00000344824 TMED7Q9Y3B3 224 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms