RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LILRA5A6NI73 299 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 ACOD1A6NK06 481 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 RHPN2P1A8MT19 583 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 TMEM150CB9EJG8 249 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 FLRT2O43155 660 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 OR2B3O76000 313 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 RPP14O95059 124 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 GUSBP08236 651 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SLC37A1P57057 533 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SERTAD2Q14140 314 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 CDONQ4KMG0 1287 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 WBP2NLQ6ICG8 309 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 NOXA1Q86UR1 476 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 JAZF1Q86VZ6 243 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 IZUMO1Q8IYV9 350 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 YIPF7Q8N8F6 280 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF527Q8NB42 609 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 CUTCQ9NTM9 273 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 BLACEA4D250 179 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 PRR32B1ATL7 298 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 INMT-MINDY4F8WBC2 141 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SMLR1H3BR10 107 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 OGG1O15527 345 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 CD3GP09693 182 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 MYF5P13349 255 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 CD27P26842 260 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 MST1P26927 711 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 CTXN1P60606 82 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 RPS11P62280 158 aaKnown RBP eCLIP13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SKP2Q13309 424 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 GGTLC2Q14390 218 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 GRM7Q14831 915 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 TCTE1Q5JU00 501 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 TMEM151BQ8IW70 566 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 SLC43A2Q8N370 569 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 TRIM63Q969Q1 353 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF578Q96N58 590 aaPredicted RBP13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF285Q96NJ3 590 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 TMEM246Q9BRR3 403 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 RTN4RQ9BZR6 473 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 LANCL2Q9NS86 450 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
VIPAS39-202ENST00000343765 A0A1W2PR77 199 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 KHNYNO15037 678 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ORC5O43913 435 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF217O75362 1048 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 SERPINA3P01011 423 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ARSBP15848 533 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 OR1D5P58170 312 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF74Q16587 644 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ZSWIM7Q19AV6 140 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ATG4DQ86TL0 474 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 SYS1Q8N2H4 156 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 HSD17B8Q92506 261 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 DERL3Q96Q80 235 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ELF4Q99607 663 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ALG12Q9BV10 488 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 SRA1Q9HD15 236 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 TEKT2Q9UIF3 430 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 CELSR3Q9NYQ7 3312 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 TRAV6A0A075B6T7 132 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 H3BSH0 61 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ICOSLGO75144 302 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 EPXP11678 715 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 HLA-DMAP28067 261 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ARL4DP49703 201 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 PRPS1P60891 318 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 RPS4XP62701 263 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ZP2Q05996 745 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 ALG10Q5BKT4 473 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 OTPQ5XKR4 325 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 KTI12Q96EK9 354 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 RNF170Q96K19 258 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 MARVELD1Q9BSK0 173 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 NOX4Q9NPH5 578 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC2A4RGQ9NR83 387 aa13.58□□□□□ -0.24
VIPAS39-202ENST00000343765 NOTOA8MTQ0 251 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 H0YIG0 161 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF264O43296 627 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 RPS27P42677 84 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 FOXL2P58012 376 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 RPL6Q02878 288 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 CDK10Q15131 360 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 HSD17B12Q53GQ0 312 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 C1orf189Q5VU69 101 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 RPL22L1Q6P5R6 122 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF440Q8IYI8 595 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF433Q8N7K0 673 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 DDOQ99489 341 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 TVP23AA6NH52 213 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 METTL12A8MUP2 240 aa13.57□□□□□ -0.24
VIPAS39-202ENST00000343765 ARPC3O15145 178 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms