RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RYDENQ9NUL5 291 aaKnown RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 CNIH4Q9P003 139 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 ENOPH1Q9UHY7 261 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 FBXL2Q9UKC9 423 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 POFUT2Q9Y2G5 429 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 A0A0G2JMM0 328 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 A0A1W2PPB8 328 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 A0A1W2PRS3 328 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 KIR3DP1A8MWS1 328 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 GNB5O14775 395 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 MAKP20794 623 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 CD96P40200 585 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 GNG2P59768 71 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
CXCL12-201ENST00000343575 EGR4Q05215 589 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 CBFBQ13951 182 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 QPRTQ15274 297 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 ATAD3CQ5T2N8 411 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 ARSKQ6UWY0 536 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 ENTHD1Q8IYW4 607 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
CXCL12-201ENST00000343575 CYP4Z2PQ8N1L4 340 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 FADS6Q8N9I5 356 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 CEP19Q96LK0 163 aa13.32□□□□□ -0.28
CXCL12-201ENST00000343575 ANKUB1A6NFN9 424 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 HMX3A6NHT5 357 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 NOTOA8MTQ0 251 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 G3V3Y1 287 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 NEURL1O76050 574 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 FUT1P19526 365 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 PGCP20142 388 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 TACR3P29371 465 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 GPR4P46093 362 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 DLX5P56178 289 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SMN1Q16637 294 aaKnown RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SPINK14Q6IE38 97 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 RTL4Q6ZR62 310 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 KIF18BQ86Y91 864 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 OR2M3Q8NG83 312 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 KCNE4Q8WWG9 221 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SLC30A2Q9BRI3 323 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 UCK2Q9BZX2 261 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 DEPPQ9NTK1 212 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 PPP4R1LQ9P1A2 415 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 RPS6KB2Q9UBS0 482 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 LAMA5O15230 3695 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CEP295Q9C0D2 2601 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 A6NL46 340 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ETV2O00321 342 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 NUDT14O95848 222 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 WDPCPO95876 746 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CHMP24386 653 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 RBM34P42696 430 aaKnown RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CYB561P49447 251 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 RGS6P49758 472 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CTBP2P56545 445 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ABHD17BQ5VST6 288 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ADGRG3Q86Y34 549 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 PSD4Q8NDX1 1056 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 SIGLEC12Q96PQ1 595 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ZNF552Q9H707 407 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ZNF556Q9HAH1 456 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 RASSF1Q9NS23 344 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 TAS2R10Q9NYW0 307 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 PLA2G3Q9NZ20 509 aa13.31□□□□□ -0.28
CXCL12-201ENST00000343575 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 CAB39Q9Y376 341 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-201ENST00000343575 ACACAQ13085 2346 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 EFCAB10A6NFE3 127 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 KLK10O43240 276 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 TRIM3O75382 744 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-201ENST00000343575 SOX14O95416 240 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 OSMP13725 252 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 PRKCAP17252 672 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 FPR3P25089 353 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 MSX1P28360 303 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 RRADP55042 308 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 SUMO3P55854 103 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-201ENST00000343575 FXYD6P3P58550 94 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 FOXK1P85037 733 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 GPR50Q13585 617 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 FHL1Q13642 323 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 IRF3Q14653 427 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 C19orf48Q6RUI8 117 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 LINC00696Q6ZRV3 163 aa13.3□□□□□ -0.28
CXCL12-201ENST00000343575 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms