RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 PHC2Q8IXK0 858 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 ZIC4Q8N9L1 334 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 STK35Q8TDR2 534 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 ZNF385AQ96PM9 386 aaKnown RBP11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 SLC38A2Q96QD8 506 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 VRK1Q99986 396 aaPredicted RBP11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 KATNB1Q9BVA0 655 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 THAP1Q9NVV9 213 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 KCNS2Q9ULS6 477 aa11.41□□□□□ -0.58
NECTIN1-203ENST00000341398 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.58
NECTIN1-203ENST00000341398 LOC390937A0A1W2PQ73 354 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 PHF1O43189 567 aaPredicted RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 AHSA1O95433 338 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ERCC1P07992 297 aaPredicted RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ZCCHC18P0CG32 403 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 HNF1AP20823 631 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 EPHA3P29320 983 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 IL12AP29459 219 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 THBS2P35442 1172 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ACAA2P42765 397 aaKnown RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 SH3BGRP55822 239 aaPredicted RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 DSTNP60981 165 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 SLC25A3Q00325 362 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 BNIP2Q12982 314 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 GGTLC2Q14390 218 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 C3orf36Q3SXR2 165 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 TBRG1Q3YBR2 411 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 IQCCQ4KMZ1 466 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 CEP85LQ5SZL2 805 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 RNF220Q5VTB9 566 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 C1orf140Q5VVS0 124 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 PRAMEF8Q5VWM4 474 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 PRAMEF7Q5VXH5 474 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ATG16L1Q676U5 607 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 FAM166AQ6J272 317 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 NIPAL3Q6P499 406 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ZNF836Q6ZNA1 936 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 VRK2Q86Y07 508 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 OR4F15Q8NGB8 312 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 MAGEE2Q8TD90 523 aaPredicted RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ITCHQ96J02 903 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 SPATA9Q9BWV2 254 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 RAD21L1Q9H4I0 556 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 TPT1P8Q9HAU6 139 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 RPS6KB2Q9UBS0 482 aa11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.59
NECTIN1-203ENST00000341398 PDE5AO76074 875 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 C1QCP02747 245 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 BCHEP06276 602 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 KITP10721 976 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 APEHP13798 732 aaKnown RBP11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 ZNF43P17038 809 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 CARTPTQ16568 116 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 PDCD4Q53EL6 469 aaKnown RBP11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 ANKRD16Q6P6B7 361 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 MSANTD1Q6ZTZ1 278 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 ANKRD42Q8N9B4 389 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 MFSD8Q8NHS3 518 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 SLC38A5Q8WUX1 472 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 WDR55Q9H6Y2 383 aaPredicted RBP11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 CA10Q9NS85 328 aa11.39□□□□□ -0.59
NECTIN1-203ENST00000341398 ARPC4-TTLL3A0A0A6YYG9 625 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 IGHV1-18A0A0C4DH31 117 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 LOC100289279A0A1B0GTE1 492 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 FRS3O43559 492 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 OR2T1O43869 369 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 LGI1O95970 557 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 ETFAP13804 333 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 SRD5A1P18405 259 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 NR4A2P43354 598 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 SELENOPP49908 381 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 MPP2Q14168 576 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 ZNF311Q5JNZ3 666 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 C5orf46Q6UWT4 87 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 CCDC36Q8IYA8 594 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 CLIP4Q8N3C7 705 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 IL17RDQ8NFM7 739 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 SLC35B4Q969S0 331 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 SLC25A36Q96CQ1 311 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 PARD6BQ9BYG5 372 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 ZIM2Q9NZV7 527 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 DSPPQ9NZW4 1301 aa11.38□□□□□ -0.59
NECTIN1-203ENST00000341398 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 C5orf58C9J3I9 102 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 AKAP8O43823 692 aaKnown RBP11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 SLC43A1O75387 559 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 LY6HO94772 140 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 OR4A8P0C604 315 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 ROR2Q01974 943 aaKnown RBP11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 NAAAQ02083 359 aa11.37□□□□□ -0.59
NECTIN1-203ENST00000341398 C1DQ13901 141 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms