RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KIAA1024LP59773 190 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 ZNHIT3Q15649 155 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 KCNK15Q9H427 330 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 NRIP3Q9NQ35 241 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 CA10Q9NS85 328 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 NPFFR2Q9Y5X5 522 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 TDRD6O60522 2096 aaKnown RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 A0A0A6YYC8 382 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 OR6C68A6NDL8 312 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 I3L1I5 382 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 KRT33AO76009 404 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 AQP2P41181 271 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 ACTC1P68032 377 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 ACTA1P68133 377 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 USP53Q70EK8 1073 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 MOSPD2Q8NHP6 518 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 THEM6Q8WUY1 208 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 C2orf42Q9NWW7 574 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 MAB21L2Q9Y586 359 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 AHCTF1Q8WYP5 2266 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 LGALS8O00214 317 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 CSTAP01040 98 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 THBS1P07996 1170 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 HPGDP15428 266 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 LSSP48449 732 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 LBX1P52954 281 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 TRAM1Q15629 374 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 SLC22A10Q63ZE4 541 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 OR5M10Q6IEU7 315 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.3
CPSF7-201ENST00000340437 CSNK1A1LQ8N752 337 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 TOR1AIP2Q8NFQ8 470 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 S100A16Q96FQ6 103 aaKnown RBP13.21□□□□□ -0.3
CPSF7-201ENST00000340437 DHRS9Q9BPW9 319 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 ZFYVE21Q9BQ24 234 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 KIR3DX1Q9H7L2 352 aa13.21□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF879B4DU55 563 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PTP4A3O75365 173 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ADH1BP00325 375 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ATP1B1P05026 303 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 NANOS3P60323 173 aaKnown RBP13.2□□□□□ -0.3
CPSF7-201ENST00000340437 LGALS3BPQ08380 585 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PUDPQ08623 228 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 FCRL6Q6DN72 434 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-201ENST00000340437 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PXKQ7Z7A4 578 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 DVL3Q92997 716 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-201ENST00000340437 SFXN2Q96NB2 322 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 RBP7Q96R05 134 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ABRACLQ9P1F3 81 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 CDV3Q9UKY7 258 aaKnown RBP13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PIN1P1O15428 100 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ZFPL1O95159 310 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 IGKV1D-16P01601 117 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PLAURQ03405 335 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PLA2G7Q13093 441 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ANGPTL6Q8NI99 470 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 LMF1Q96S06 567 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 HEXA-AS1Q9H8Q6 139 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 HEBP2Q9Y5Z4 205 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 REV3LO60673 3130 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 A0A0B4J2E0 115 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 A0A1B0GX12 115 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 BRINP1O60477 761 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 CSN2P05814 226 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 CDK2P24941 298 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ADPRHP54922 357 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 OPCMLQ14982 345 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 COL28A1Q2UY09 1125 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF613Q6PF04 617 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 OR11G2Q8NGC1 345 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 OR4C3Q8NH37 302 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 TRPV4Q9HBA0 871 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 KLHL9Q9P2J3 617 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
CPSF7-201ENST00000340437 MEIKINA0A087WXM9 373 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 A0A1W2PPL8 197 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ANXA2P2A6NMY6 339 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 H0YC42 278 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ANXA2P07355 339 aaKnown RBP13.19□□□□□ -0.3
CPSF7-201ENST00000340437 BTN1A1Q13410 526 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 ENPP2Q13822 863 aa13.19□□□□□ -0.3
CPSF7-201ENST00000340437 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-201ENST00000340437 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms