RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TTC36A6NLP5 189 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 FADS1O60427 444 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 IFNGP01579 166 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 SPNP16150 400 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 SPI1P17947 270 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 AHCYP23526 432 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 CXCR1P25024 350 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 OVCH1Q7RTY7 1134 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.04□□□□□ -0.16
MBD1-203ENST00000339998 OR52N1Q8NH53 320 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 NEIL3Q8TAT5 605 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 MIXL1Q9H2W2 232 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 PALMDQ9NP74 551 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 PCDHGB6Q9Y5F9 930 aa14.04□□□□□ -0.16
MBD1-203ENST00000339998 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 FREM3P0C091 2139 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 IGLV3-12A0A075B6K2 115 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 TOX3O15405 576 aaPredicted RBP14.03□□□□□ -0.16
MBD1-203ENST00000339998 RNF13O43567 381 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 UPK1BO75841 260 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 OXA1LQ15070 435 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 TMEM44Q2T9K0 475 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 COL28A1Q2UY09 1125 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 ARSKQ6UWY0 536 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 DPY19L2P2Q6ZN68 376 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 CCDC190Q86UF4 302 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 ZNF440Q8IYI8 595 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 FAM181AQ8N9Y4 354 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 DDOQ99489 341 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 TGIF2Q9GZN2 237 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 ADAM19Q9H013 955 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 TIGARQ9NQ88 270 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 B3GNT3Q9Y2A9 372 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 PEX16Q9Y5Y5 336 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 BOLA2-SMG1P6H3BVE0 249 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 ANKRD34CP0C6C1 535 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 ASAH2BP0C7U1 165 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 SHC1P29353 583 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 RANBP1P43487 201 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 SPANXN2Q5MJ10 180 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 TMPRSS11AQ6ZMR5 421 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 GDPGP1Q6ZNW5 385 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 DMXL1Q9Y485 3027 aa14.03□□□□□ -0.16
MBD1-203ENST00000339998 SAGE2PA6NJ88 616 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 D6RAR5 112 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 LOC110117498-PIK3R3F6TDL0 507 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 TO15178 435 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 PPM1BO75688 479 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 PNMTP11086 282 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 CALRP27797 417 aaKnown RBP14.02□□□□□ -0.16
MBD1-203ENST00000339998 PNLIPRP2P54317 469 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 DCAF7P61962 342 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 POC5Q8NA72 575 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 OR5M1Q8NGP8 315 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 ARRDC1-AS1Q9H2J1 176 aa14.02□□□□□ -0.16
MBD1-203ENST00000339998 A0A1B0GVC2 190 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 TMEM72A0PK05 275 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 A6NIN4 97 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 OR2J2O76002 312 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 TGM1P22735 817 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 OR10A3P58181 314 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 IL20RBQ6UXL0 311 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 FAM122BQ7Z309 247 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 NANOGNBQ7Z5D8 188 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 ADGRG3Q86Y34 549 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 LRRC75AQ8NAA5 344 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 NAT6Q93015 286 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 TSPAN32Q96QS1 320 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 SLC30A2Q9BRI3 323 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 MROQ9BYG7 248 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 EXOSC3Q9NQT5 275 aaKnown RBP14.02□□□□□ -0.17
MBD1-203ENST00000339998 ACOXLQ9NUZ1 547 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 SLC6A5Q9Y345 797 aa14.02□□□□□ -0.17
MBD1-203ENST00000339998 COL5A1P20908 1838 aaPredicted RBP14.02□□□□□ -0.17
MBD1-203ENST00000339998 FUOMA2VDF0 154 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 RUNX1T1Q06455 604 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 SQSTM1Q13501 440 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 PON3Q15166 354 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 MESTQ5EB52 335 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 CD200R1LQ6Q8B3 271 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 ARL5BQ96KC2 179 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 PDCD1LG2Q9BQ51 273 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 HIF3AQ9Y2N7 669 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 CFAP47Q6ZTR5 3102 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 TRDV1A0A1B0GX56 115 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 SUSD5O60279 629 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 PSPHP78330 225 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 ZNF79Q15937 498 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 BAK1Q16611 211 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 ZSWIM7Q19AV6 140 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
MBD1-203ENST00000339998 SPATC1Q76KD6 591 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 VASH1Q7L8A9 365 aaPredicted RBP14.01□□□□□ -0.17
MBD1-203ENST00000339998 CPEB2Q7Z5Q1 589 aaKnown RBP14.01□□□□□ -0.17
MBD1-203ENST00000339998 OR8H2Q8N162 312 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 OR10G3Q8NGC4 313 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 HSD17B8Q92506 261 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 SYT4Q9H2B2 425 aa14.01□□□□□ -0.17
MBD1-203ENST00000339998 ETAA1Q9NY74 926 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms