RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PPM1BO75688 479 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 CXCR1P25024 350 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 ACVR1BP36896 505 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 GRK6P43250 576 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC26A5P58743 744 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TPBGQ13641 420 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 BTBD16Q32M84 506 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 LEG1Q6P5S2 330 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM205Q6UW68 189 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 FAM198BQ6UWH4 519 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM91Q6ZNR0 172 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 FAM122BQ7Z309 247 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 LRRC75AQ8NAA5 344 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 OR5J2Q8NH18 312 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC39A7Q92504 469 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 C4orf36Q96KX1 117 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 PTDSS2Q9BVG9 487 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 FBXO8Q9NRD0 319 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 MYOTQ9UBF9 498 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 COPS3Q9UNS2 423 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SPTBN2O15020 2390 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PPK0 400 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 OR6C76A6NM76 312 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 YKT6O15498 198 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 EFNA2O43921 213 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SUSD5O60279 629 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 PNMTP11086 282 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 HLA-DOBP13765 273 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 AHCYP23526 432 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 GTF2E2P29084 291 aaKnown RBP6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 HOXD12P35452 270 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 NRG3P56975 720 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TUBA1BP68363 451 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TMED1Q13445 227 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 IL11RAQ14626 422 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TP53I3Q53FA7 332 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 ALG10Q5BKT4 473 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 PRAMEF20Q5VT98 475 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 RPL13AP3Q6NVV1 102 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 LYPD8Q6UX82 237 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 DPY19L2P2Q6ZN68 376 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TUBA1AQ71U36 451 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 MARCH9Q86YJ5 346 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 GID4Q8IVV7 300 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF440Q8IYI8 595 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 FAM83FQ8NEG4 500 aaPredicted RBP6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 OR13C5Q8NGS8 318 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 FNDC8Q8TC99 324 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC39A1Q9NY26 324 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 ING1Q9UK53 422 aaPredicted RBP6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 SSR3Q9UNL2 185 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF292O60281 2723 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 FREM3P0C091 2139 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TMED7-TICAM2A0A0A6YYA0 188 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC22A31A6NKX4 558 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF670-ZNF695F2Z2N8 137 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 G3V3Y1 287 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 SPI1P17947 270 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 UQCRC1P31930 480 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 MAGEB1P43366 347 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 P2RX1P51575 399 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 RUNX1T1Q06455 604 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 DNASE1L3Q13609 305 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 GALEQ14376 348 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 PCOLCEQ15113 449 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ZSWIM7Q19AV6 140 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ZMAT1Q5H9K5 638 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC6A19Q695T7 634 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ARHGAP11AQ6P4F7 1023 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 DBX2Q6ZNG2 339 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TIPARPQ7Z3E1 657 aaKnown RBP6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 NR2C2APQ86WQ0 139 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 KLHL36Q8N4N3 616 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ARIH2OSQ8N7S6 290 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 LSM14AQ8ND56 463 aaKnown RBP6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 KBTBD8Q8NFY9 601 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 B4GALNT2Q8NHY0 566 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 UFD1Q92890 307 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TSPAN32Q96QS1 320 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM43Q9BTV4 400 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 NXF2Q9GZY0 626 aaKnown RBP6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 NUAK2Q9H093 628 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM185BQ9H7F4 350 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 ANKRD10Q9NXR5 420 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 FBXL2Q9UKC9 423 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC6A5Q9Y345 797 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TMED7Q9Y3B3 224 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PQD3 144 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 TVP23AA6NH52 213 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 H3BML4 177 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 RGS5O15539 181 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 BGLAPP02818 100 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 KLK3P07288 261 aaPredicted RBP6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 PSKH1P11801 424 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 GP1BBP13224 206 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 PTGDSP41222 190 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 MC2RQ01718 297 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC3A1Q07837 685 aa6.7□□□□□ -1.34
SRFBP1-201ENST00000339397 CBFBQ13951 182 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms