RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 NELFAQ9H3P2 528 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PTGES2Q9H7Z7 377 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CA10Q9NS85 328 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 LMBRD1Q9NUN5 540 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 FBXL7Q9UJT9 491 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 KCNJ14Q9UNX9 436 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ITM2BQ9Y287 266 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLC35A3Q9Y2D2 325 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CMAHPQ9Y471 501 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 FRYQ5TBA9 3013 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 AHCTF1Q8WYP5 2266 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TRBV11-1A0A0K0K1C0 115 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ODAMA1E959 279 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF587BE7ETH6 402 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 B3GALT2O43825 422 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLC25A14O95258 325 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 IGLV1-51P01701 117 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PLA2G1BP04054 148 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 FBP1P09467 338 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ACP5P13686 325 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ATP6V1B1P15313 513 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 IGHV1-2P23083 117 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 IVDP26440 423 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ADORA2BP29275 332 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PPIFP30405 207 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SDHAP31040 664 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CD68P34810 354 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 POU3F4P49335 361 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ENTPD1P49961 510 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MMP15P51511 669 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CTBP2P56545 445 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLC35A1P78382 337 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MYL5Q02045 173 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CIRBPQ14011 172 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TTC32Q5I0X7 151 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PAGE2BQ5JRK9 111 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 HP1BP3Q5SSJ5 553 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CFAP58Q5T655 872 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SPATA31B1PQ5VZV4 182 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF770Q6IQ21 691 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 LEKR1Q6ZMV7 388 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CCDC80Q76M96 950 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ELMOD2Q8IZ81 293 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CMTM4Q8IZR5 234 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SYCP3Q8IZU3 236 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 KRT78Q8N1N4 520 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 C15orf53Q8NAA6 179 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 C2CD4AQ8NCU7 369 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 RBM15BQ8NDT2 890 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 RHEBL1Q8TAI7 183 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 DOK4Q8TEW6 326 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF483Q8TF39 744 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 KCTD4Q8WVF5 259 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MARC2Q969Z3 335 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SPSB4Q96A44 273 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 HAUS1Q96CS2 278 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MISP3Q96FF7 219 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PERPQ96FX8 193 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CABS1Q96KC9 395 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF681Q96N22 645 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ADOQ96SZ5 270 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SERPINI1Q99574 410 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PECRQ9BY49 303 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 EGLN1Q9GZT9 426 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 GHITMQ9H3K2 345 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 COQ10BQ9H8M1 238 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 RNPEPL1Q9HAU8 725 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SSU72Q9NP77 194 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLC2A9Q9NRM0 540 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MKS1Q9NXB0 559 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PLK2Q9NYY3 685 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLC17A6Q9P2U8 582 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CD84Q9UIB8 345 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SCOCQ9UIL1 159 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 C19orf53Q9UNZ5 99 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 GAB2Q9UQC2 676 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TCF19Q9Y242 345 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ASB4Q9Y574 426 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 DOPEY2Q9Y3R5 2298 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PLCE1Q9P212 2302 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TRAV6A0A075B6T7 132 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM120BA0PK00 339 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 LRIT2A6NDA9 550 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SMIM9A6NGZ8 99 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 E7ENX8 843 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 H0YL77 283 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF195O14628 629 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 IDH3BO43837 385 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 IGHG4P01861 327 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 RFPL3SP0C7P2 107 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PBLDP30039 288 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 FCGR2BP31994 310 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 HOXA1P49639 335 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 DLX6P56179 175 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 KCNJ2P63252 427 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PLGLB1Q02325 96 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF816Q0VGE8 651 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 STK4Q13043 487 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 MSMPQ1L6U9 139 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms