RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
RFTN1-201ENST00000334133 ZNF433Q8N7K0 673 aaPredicted RBP17.28■□□□□ 0.36
RFTN1-201ENST00000334133 OR2T27Q8NH04 317 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 ACOT12Q8WYK0 555 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 KCNJ15Q99712 375 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 NRIP3Q9NQ35 241 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 CUTCQ9NTM9 273 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 ING1Q9UK53 422 aaPredicted RBP17.28■□□□□ 0.36
RFTN1-201ENST00000334133 ICAM5Q9UMF0 924 aa17.28■□□□□ 0.36
RFTN1-201ENST00000334133 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 GRK6P43250 576 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 PITPNBP48739 271 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 DIO1P49895 249 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 CLDN12P56749 244 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 CTXN1P60606 82 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 RPS11P62280 158 aaKnown RBP eCLIP17.27■□□□□ 0.36
RFTN1-201ENST00000334133 DPY19L2P2Q6ZN68 376 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 YIPF7Q8N8F6 280 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 SMIM19Q96E16 107 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 MESP1Q9BRJ9 268 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 LANCL2Q9NS86 450 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 GMEB2Q9UKD1 530 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 MUC3AQ02505 3323 aa17.27■□□□□ 0.36
RFTN1-201ENST00000334133 A0A1W2PR77 199 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 SCDO00767 359 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 ICOSLGO75144 302 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 NUDT14O95848 222 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 GALP22466 123 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 ITPKBP27987 946 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 NANOS3P60323 173 aaKnown RBP17.27■□□□□ 0.35
RFTN1-201ENST00000334133 EGR4Q05215 589 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 SF3A2Q15428 464 aaKnown RBP17.27■□□□□ 0.35
RFTN1-201ENST00000334133 LSM14AQ8ND56 463 aaKnown RBP17.27■□□□□ 0.35
RFTN1-201ENST00000334133 RFT1Q96AA3 541 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 TMEM246Q9BRR3 403 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 TSPAN10Q9H1Z9 355 aaPredicted RBP17.27■□□□□ 0.35
RFTN1-201ENST00000334133 UBQLN4Q9NRR5 601 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 KLHDC2Q9Y2U9 406 aa17.27■□□□□ 0.35
RFTN1-201ENST00000334133 TMEM72A0PK05 275 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 ADRB1P08588 477 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 OR8G3PP0DMU2 310 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 GAAP10253 952 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 CD27P26842 260 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 HES5Q5TA89 166 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 ALG12Q9BV10 488 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 MCUBQ9NWR8 336 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 RNF215Q9Y6U7 377 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 TLCD2A6NGC4 264 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 ARL4DP49703 201 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 POU4F2Q12837 409 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 Q5BKY6 102 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 NOX4Q9NPH5 578 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 MRPL15Q9P015 296 aaKnown RBP17.26■□□□□ 0.35
RFTN1-201ENST00000334133 PRODH2Q9UF12 536 aa17.26■□□□□ 0.35
RFTN1-201ENST00000334133 METTL12A8MUP2 240 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 INMT-MINDY4F8WBC2 141 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 HCRTR2O43614 444 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 TACR3P29371 465 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 PSMD4P55036 377 aaKnown RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 DGCR2P98153 550 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 SKP2Q13309 424 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 MARCH3Q86UD3 253 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 SERPINA12Q8IW75 414 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 OR14A16Q8NHC5 309 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ZNF671Q8TAW3 534 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 SLC2A12Q8TD20 617 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 OR2B2Q9GZK3 357 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 KLHL21Q9UJP4 597 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 WDFY4Q6ZS81 3184 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 C11orf98E9PRG8 122 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 NPR2P20594 1047 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 NR0B1P51843 470 aaKnown RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 GRM7Q14831 915 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ZNF74Q16587 644 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ALG10Q5BKT4 473 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 C16orf47Q6ZP98 133 aaPredicted RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 KANSL1Q7Z3B3 1105 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 JAZF1Q86VZ6 243 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 MS4A15Q8N5U1 240 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 DDOQ99489 341 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 NOX1Q9Y5S8 564 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ASCC3Q8N3C0 2202 aaKnown RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 FLRT2O43155 660 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ZNF264O43296 627 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 PPM1BO75688 479 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 PLGP00747 810 aaPredicted RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 EPXP11678 715 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 SOX2P48431 317 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 LGALS3BPQ08380 585 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 BCL2A1Q16548 175 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 CDONQ4KMG0 1287 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 CEP78Q5JTW2 689 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 WBP2NLQ6ICG8 309 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 ATG4DQ86TL0 474 aaPredicted RBP17.25■□□□□ 0.35
RFTN1-201ENST00000334133 DUSP18Q8NEJ0 188 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 TRIM63Q969Q1 353 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 LPAR4Q99677 370 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 NUDT9Q9BW91 350 aa17.25■□□□□ 0.35
RFTN1-201ENST00000334133 OGG1O15527 345 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms