RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SLC41A3Q96GZ6 507 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 NSL1Q96IY1 281 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 GMPR2Q9P2T1 348 aaKnown RBP12.42□□□□□ -0.42
LIMS1-201ENST00000332345 SLC7A7Q9UM01 511 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 B3GALT5Q9Y2C3 310 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 APCP25054 2843 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 FAM221AA4D161 298 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF682O95780 498 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 TNFRSF1BP20333 461 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 IL32P24001 234 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 OR1E2P47887 323 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
LIMS1-201ENST00000332345 FBXW9Q5XUX1 488 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 ANKRD34AQ69YU3 496 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 GLYATQ6IB77 296 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 FKBP9P1Q75LS8 142 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 C10orf53Q8N6V4 93 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 FAM162AQ96A26 154 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 LURAP1Q96LR2 239 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 CDRT15Q96T59 188 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 SLC19A3Q9BZV2 496 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 RASSF1Q9NS23 344 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 RIMS3Q9UJD0 308 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 RPS6KA6Q9UK32 745 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
LIMS1-201ENST00000332345 B2RBV5 119 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 OR5F1O95221 314 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 SERPINA1P01009 418 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 THRBP10828 461 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF43P17038 809 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 GGT1P19440 569 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 GRPRP30550 384 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 NTF4P34130 210 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 P2RY4P51582 365 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 POU4F3Q15319 338 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 SPATS1Q496A3 300 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 CASP12Q6UXS9 341 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 AAED1Q7RTV5 226 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 SCAIQ8N9R8 606 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
LIMS1-201ENST00000332345 KISS1RQ969F8 398 aaPredicted RBP12.4□□□□□ -0.42
LIMS1-201ENST00000332345 TMEM45BQ96B21 275 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 HS6ST2Q96MM7 605 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 OXGR1Q96P68 337 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
LIMS1-201ENST00000332345 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 ASB6Q9NWX5 421 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 UPB1Q9UBR1 384 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 EGFL7Q9UHF1 273 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 ABCA4P78363 2273 aa12.4□□□□□ -0.42
LIMS1-201ENST00000332345 LOC102725191A0A1B0GVB3 256 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 OR6C65A6NJZ3 312 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 M0R082 166 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 FZD7O75084 574 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 LYPD3O95274 346 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 BGLAPP02818 100 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 THY1P04216 161 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 HIST1H2ABP04908 130 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 IFNW1P05000 195 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 HSD17B1P14061 328 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 NQO1P15559 274 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 NCK1P16333 377 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 CALB2P22676 271 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 CBLP22681 906 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 PMS2P3Q13401 168 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 PIN1Q13526 163 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 C1DQ13901 141 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 IFI44LQ53G44 452 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 HIST3H2AQ7L7L0 130 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 VTCN1Q7Z7D3 282 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 DEFB107AQ8IZN7 70 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 KDM8Q8N371 416 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 RNF148Q8N7C7 305 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ZIC4Q8N9L1 334 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 POMGNT2Q8NAT1 580 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ADPRHL1Q8NDY3 354 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF417Q8TAU3 575 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 HSD17B8Q92506 261 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 HIST1H2ACQ93077 130 aa12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 ZNF587Q96SQ5 575 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-201ENST00000332345 GORASP2Q9H8Y8 452 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms