RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TMIGD3P0DMS9 266 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 NPR2P20594 1047 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 HTR2AP28223 471 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CEACAM8P31997 349 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 EIF1AXP47813 144 aaKnown RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 DIO1P49895 249 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CLDN15P56746 228 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 FOXL2P58012 376 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 MS4A2Q01362 244 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 RASGEF1BQ0VAM2 473 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 FAHD1Q6P587 224 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 PODNL1Q6PEZ8 512 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 KLHL24Q6TFL4 600 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CASP12Q6UXS9 341 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 C16orf47Q6ZP98 133 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 VTCN1Q7Z7D3 282 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ADGRE4PQ86SQ3 457 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 GPR137CQ8N3F9 429 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 Q8NA96 180 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CCDC54Q8NEL0 328 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 OR2T33Q8NG76 320 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 NUDT8Q8WV74 236 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 RNF31Q96EP0 1072 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF845Q96IR2 970 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 TXNIPQ9H3M7 391 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ATPIF1Q9UII2 106 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 BLOC1S6Q9UL45 172 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 TESMINQ9Y4I5 508 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 KLF2Q9Y5W3 355 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CEP250Q9BV73 2442 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 hCG_2039718K7EN88 272 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 TSPAN19P0C672 248 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ANPEPP15144 967 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 CBLP22681 906 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 IGFBP5P24593 272 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 GRPRP30550 384 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 SLC25A1P53007 311 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 SUCLG1P53597 346 aaKnown RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 VLDLRP98155 873 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 EXOC3L2Q2M3D2 409 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 FBXL19-AS1Q494R0 122 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 GXYLT1Q4G148 440 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ALG10Q5BKT4 473 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 PPP4R4Q6NUP7 873 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ARSKQ6UWY0 536 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ZBTB49Q6ZSB9 765 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF100Q8IYN0 542 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 FAM169BQ8N8A8 192 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 IL17RDQ8NFM7 739 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 OR1J2Q8NGS2 313 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 SH3GL3Q99963 347 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 FUZQ9BT04 418 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 GABARAPL3Q9BY60 117 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 YTHDF1Q9BYJ9 559 aaKnown RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 PDP1Q9P0J1 537 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 H2AFY2Q9P0M6 372 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 ERRFI1Q9UJM3 462 aaPredicted RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 GPR52Q9Y2T5 361 aa4.64□□□□□ -1.67
LRIT3-201ENST00000327908 TNRC6AQ8NDV7 1962 aaKnown RBP4.64□□□□□ -1.67
LRIT3-201ENST00000327908 SPTBP11277 2137 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 REV3LO60673 3130 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 A0A1B0GTH9 108 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 KHDRBS3O75525 346 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 BAG2O95816 211 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 ASAH2BP0C7U1 165 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 RPL4P36578 427 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 TPD52P55327 224 aaPredicted RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 RPL27P61353 136 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 RPS4XP62701 263 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 IL1RL1Q01638 556 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 OR7A5Q15622 319 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 THEM4Q5T1C6 240 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 FAM219BQ5XKK7 198 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 LPCAT4Q643R3 524 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 SLC27A4Q6P1M0 643 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 TMEM53Q6P2H8 277 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 CBLN3Q6UW01 205 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 SYT9Q86SS6 491 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 CD163Q86VB7 1156 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 ROBO4Q8WZ75 1007 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 APH1AQ96BI3 265 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 DCLRE1CQ96SD1 692 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 PRSS27Q9BQR3 290 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 POLDIP3Q9BY77 421 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 QRSL1Q9H0R6 528 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 NOSIPQ9Y314 301 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 MEMO1Q9Y316 297 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 A0A087WUU8 490 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 A0A0J9YW62 118 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 SLC22A23A1A5C7 686 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 CLDN24A6NM45 220 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 FTCDNL1E5RQL4 147 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF587BE7ETH6 402 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 J3QW42 95 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 PLPP3O14495 311 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 OIP5O43482 229 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 RNF13O43567 381 aa4.63□□□□□ -1.67
LRIT3-201ENST00000327908 MRPL33O75394 65 aaKnown RBP4.63□□□□□ -1.67
LRIT3-201ENST00000327908 KRT33AO76009 404 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms