RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ZNF350Q9GZX5 532 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 MED29Q9NX70 200 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 KCNE5Q9UJ90 142 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 FARSAQ9Y285 508 aaKnown RBP12.47□□□□□ -0.41
SRRM1-201ENST00000323848 IGHV1OR21-1A0A087WYE8 117 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 ARL6IP5O75915 188 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 ERGP11308 486 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 PTHLHP12272 177 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 HMGA2P52926 109 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 SNRPGP62308 76 aaKnown RBP12.47□□□□□ -0.41
SRRM1-201ENST00000323848 CCL7P80098 99 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 HLA-BQ31612 363 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 SPEM1Q8N4L4 309 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 TOR1AIP2Q8NFQ8 470 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 KTI12Q96EK9 354 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-201ENST00000323848 C10orf90Q96M02 699 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 TSPAN10Q9H1Z9 355 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-201ENST00000323848 EPHA6Q9UF33 1036 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
SRRM1-201ENST00000323848 OIP5O43482 229 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 RFPL3O75679 317 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 ZIC2O95409 532 aaPredicted RBP12.46□□□□□ -0.41
SRRM1-201ENST00000323848 TACSTD2P09758 323 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 IL7P13232 177 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
SRRM1-201ENST00000323848 EMP3P54852 163 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 HSD17B7P56937 341 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
SRRM1-201ENST00000323848 WBP2NLQ6ICG8 309 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.46□□□□□ -0.41
SRRM1-201ENST00000323848 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 MORN4Q8NDC4 146 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 NT5CQ8TCD5 201 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 S100A13Q99584 98 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 CKLFQ9UBR5 152 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 A0A1B0GX78 115 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 VSTM2BA6NLU5 285 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 SUSD5O60279 629 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 IGKV1D-16P01601 117 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 SBK2P0C263 348 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 C21orf58P58505 322 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 P2RY14Q15391 338 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 MOGAT1Q96PD6 335 aa12.46□□□□□ -0.41
SRRM1-201ENST00000323848 PRICKLE3O43900 615 aaPredicted RBP12.46□□□□□ -0.42
SRRM1-201ENST00000323848 AKR7A3O95154 331 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 ATP1B1P05026 303 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 CD2P06729 351 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 TGFBR2P37173 567 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.42
SRRM1-201ENST00000323848 ACY1Q03154 408 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 SCGB2B2Q4G0G5 96 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 MAMDC2Q7Z304 686 aaPredicted RBP12.46□□□□□ -0.42
SRRM1-201ENST00000323848 CADM3Q8N126 398 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 SERINC1Q9NRX5 453 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 LIMS3P0CW19 117 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 LIMS4P0CW20 117 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 HSD11B1P28845 292 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 SRP9P49458 86 aaKnown RBP12.46□□□□□ -0.42
SRRM1-201ENST00000323848 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 ZNF566Q969W8 418 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 FRMD6Q96NE9 622 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 MED28Q9H204 178 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 MEPEQ9NQ76 525 aaPredicted RBP12.46□□□□□ -0.42
SRRM1-201ENST00000323848 KLK4Q9Y5K2 254 aa12.46□□□□□ -0.42
SRRM1-201ENST00000323848 LAMA1P25391 3075 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 HTR1FP30939 366 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 PLK5Q496M5 336 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 LYSMD2Q8IV50 215 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 OR2AJ1Q8NGZ0 328 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 OR2T4Q8NH00 348 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 NR4A3Q92570 626 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 RBP7Q96R05 134 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 SATB2Q9UPW6 733 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 ZNF337Q9Y3M9 751 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
SRRM1-201ENST00000323848 IGHV3-9P01782 118 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 BAK1Q16611 211 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 MEIOBQ8N635 442 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 SUN5Q8TC36 379 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 DSCR3O14972 297 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 ITGA10O75578 1167 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 EPPINO95925 133 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 DHFRP00374 187 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 LIPCP11150 499 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 SPNP16150 400 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 HOXB9P17482 250 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-201ENST00000323848 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.421e-7■■■■□ 23.5
SRRM1-201ENST00000323848 NR0B2Q15466 257 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 COL28A1Q2UY09 1125 aa12.45□□□□□ -0.42
SRRM1-201ENST00000323848 RBM24Q9BX46 236 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms