RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 INTS14Q96SY0 518 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 HOXD1Q9GZZ0 328 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 TMEM74BQ9NUR3 256 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 SRPK3Q9UPE1 567 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ANKRD36A6QL64 1941 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 A0A1B0GX78 115 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 PRAMEF25A6NGN4 478 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 METTL15A6NJ78 407 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF593O00488 134 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-201ENST00000321105 AKR7A3O95154 331 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 HBQ1P09105 142 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 GRK5P34947 590 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ACTA2P62736 377 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ACTG2P63267 376 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 FABP5Q01469 135 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 DUSP8Q13202 625 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF440Q8IYI8 595 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 PIAS4Q8N2W9 510 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-201ENST00000321105 LRRC18Q8N456 261 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 NANOGP1Q8N7R0 232 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 CEP76Q8TAP6 659 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 SLC22A8Q8TCC7 542 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 TMEM106AQ96A25 262 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 MED29Q9NX70 200 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 DTX4Q9Y2E6 619 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 FXYD6-FXYD2A0A087WZ82 144 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 PRAMEF27A3QJZ7 478 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 LYRM1O43325 122 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 SBK2P0C263 348 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 RPS15P62841 145 aaKnown RBP10.1□□□□□ -0.79
TOP3A-201ENST00000321105 DCDP81605 110 aaKnown RBP10.1□□□□□ -0.79
TOP3A-201ENST00000321105 CD300CQ08708 224 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 SCRN3Q0VDG4 424 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 PLK5Q496M5 336 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 LRRC69Q6ZNQ3 347 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 LINC00696Q6ZRV3 163 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 KANSL1Q7Z3B3 1105 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 OR5D18Q8NGL1 313 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 DYNC2LI1Q8TCX1 351 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF578Q96N58 590 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-201ENST00000321105 FXYD6Q9H0Q3 95 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 KLK4Q9Y5K2 254 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 MED13LQ71F56 2210 aa10.1□□□□□ -0.79
TOP3A-201ENST00000321105 CXorf51AA0A1B0GTR3 108 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 PIAS2O75928 621 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 WDPCPO95876 746 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 OR3A3P47888 321 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 OR3A2P47893 321 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 POU3F4P49335 361 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 MEP1BQ16820 701 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 DGAT2L6Q6ZPD8 337 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 DRAXINQ8NBI3 349 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 AGBL5Q8NDL9 886 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 OR13C3Q8NGS6 347 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ABHD4Q8TB40 342 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ADAMTS18Q8TE60 1221 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 NEDD4LQ96PU5 975 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 GABARAPL1Q9H0R8 117 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 KLHL13Q9P2N7 655 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TMED7-TICAM2A0A0A6YYA0 188 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 NSG1A0A0A6YYJ2 146 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 EFEMP2O95967 443 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 HTR1FP30939 366 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 MRPL19P49406 292 aaKnown RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 SIRPAP78324 504 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 PITPNAQ00169 270 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 E2F1Q01094 437 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 GLO1Q04760 184 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 CBFBQ13951 182 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 C3orf38Q5JPI3 329 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 C1QL3Q5VWW1 255 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 SLC18B1Q6NT16 456 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF417Q8TAU3 575 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 GPBAR1Q8TDU6 330 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF587Q96SQ5 575 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TMEM246Q9BRR3 403 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 NOX4Q9NPH5 578 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TBC1D24Q9ULP9 559 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TMED7Q9Y3B3 224 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TMEM14AQ9Y6G1 99 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF878C9JN71 531 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 ZFAND5O76080 213 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 MT-ND4P03905 459 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 NME1P15531 152 aaKnown RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TCN2P20062 427 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 POU3F3P20264 500 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 DUSP3P51452 185 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 CCR5P51681 352 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 KCTD9Q7L273 389 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 KLHL15Q96M94 604 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 SLC46A1Q96NT5 459 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TSPAN10Q9H1Z9 355 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-201ENST00000321105 PLEKHA6Q9Y2H5 1048 aa10.09□□□□□ -0.79
TOP3A-201ENST00000321105 TEX51A0A1B0GUA7 166 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 C13orf42A0A1B0GVH6 325 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms