RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ELOVL3Q9HB03 270 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 RYDENQ9NUL5 291 aaKnown RBP15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 TDRD6O60522 2096 aaKnown RBP15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF840PA6NDX5 716 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 CCDC85CA6NKD9 419 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 IL2RGP31785 369 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF684Q5T5D7 378 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A6P0DMU7 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A5P0DMU8 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A7P0DMV0 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A8P0DMV1 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A9P0DMV2 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 SIX1Q15475 284 aaPredicted RBP15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A2Q5DJT8 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A1Q5HYN5 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 DBX2Q6ZNG2 339 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CT45A3Q8NHU0 189 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CLDN1O95832 211 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 DDAH2O95865 285 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 S100A8P05109 93 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 THBS1P07996 1170 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 ADRB1P08588 477 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 XCR1P46094 333 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CST6Q15828 149 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 C6orf132Q5T0Z8 1188 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 WDR5BQ86VZ2 330 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.112e-7■■■□□ 18.6
SMCHD1-201ENST00000320876 METTL9Q9H1A3 318 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 GPR160Q9UJ42 338 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 TMEM200CA6NKL6 621 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 GABRR3A8MPY1 467 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 BET1O15155 118 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CHRM4P08173 479 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CTSL3PQ5NE16 218 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 COX15Q7KZN9 410 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 NIT2Q9NQR4 276 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CBX7O95931 251 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 OR2T7P0C7T2 308 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CBR1P16152 277 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 VIPR2P41587 438 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 FLI1Q01543 452 aaPredicted RBP15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 HENMT1Q5T8I9 393 aaKnown RBP15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 OR2T27Q8NH04 317 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 NEIL2Q969S2 332 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 OR14J1Q9UGF5 321 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 NME2P22392 152 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 MTNR1BP49286 362 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 PDE7AQ13946 482 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 CAMTA1Q9Y6Y1 1673 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 PPP5D1E7EU14 171 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 GJB5O95377 273 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 PDGFAP04085 211 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 TIMP2P16035 220 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 OR4N2Q8NGD1 307 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 KCNG3Q8TAE7 436 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 UGT2A1Q9Y4X1 527 aa15.74■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF778Q96MU6 729 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 CCL14Q16627 93 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 IER5LQ5T953 404 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 CD276Q5ZPR3 534 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 GTF2H5Q6ZYL4 71 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 RETREG3Q86VR2 466 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 ACOT4Q8N9L9 421 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 CMTM2Q8TAZ6 248 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC17A9Q9BYT1 436 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 VDAC3Q9Y277 283 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 DVL1O14640 695 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 F2P00734 622 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 DVL1P1P54792 670 aaPredicted RBP15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 KIR2DS3Q14952 304 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 CTU1Q7Z7A3 348 aaKnown RBP15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 KDF1Q8NAX2 398 aaPredicted RBP15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 MYOTQ9UBF9 498 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 B3GALNT1O75752 331 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 DPP4P27487 766 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC5A2P31639 672 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 FOXA1P55317 472 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 MDGA2Q7Z553 956 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 GPR174Q9BXC1 333 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 A0A0J9YY10 115 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 ZCWPW2A0A1B0GU75 182 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 SNTB1Q13884 538 aaKnown RBP15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 C4orf17Q53FE4 359 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 ENTPD2Q9Y5L3 495 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 KCNK5O95279 499 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 F3P13726 295 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 IGSF21Q96ID5 467 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 ARV1Q9H2C2 271 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 CTDSP2O14595 271 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 TAF9Q16594 264 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 OR13F1Q8NGS4 319 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 OR10Z1Q8NGY1 313 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 URGCP-MRPS24S4R325 110 aa15.73■□□□□ 0.11
SMCHD1-201ENST00000320876 TRBV4-1A0A0J9YWV2 114 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 MCRIP1C9JLW8 97 aa15.72■□□□□ 0.11
SMCHD1-201ENST00000320876 GM2AP17900 193 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms