RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SERTAD2Q14140 314 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 SAXO2Q658L1 398 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 SIAH3Q8IW03 269 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 PRR18Q8N4B5 295 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 OR5H6Q8NGV6 325 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 ZNF593O00488 134 aaPredicted RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 MRPS14O60783 128 aaKnown RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 CEACAM5P06731 702 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 TMEM205Q6UW68 189 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 LRRC28Q86X40 367 aaPredicted RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 NANOGP1Q8N7R0 232 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 RBFOX1Q9NWB1 397 aaKnown RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 GPR55Q9Y2T6 319 aaPredicted RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 CXCL10P02778 98 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 SEC22CQ9BRL7 303 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 EPHX3Q9H6B9 360 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 PLEK2Q9NYT0 353 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 C19orf25Q9UFG5 118 aaPredicted RBP15.23■□□□□ 0.03
CLIP4-201ENST00000320081 ADAM29Q9UKF5 820 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
CLIP4-201ENST00000320081 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 FARS2O95363 451 aaKnown RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 GPR50Q13585 617 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 RUNX2Q13950 521 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 MEP1BQ16820 701 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 TMEM164Q5U3C3 297 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 NXNL2Q5VZ03 156 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 SLC22A10Q63ZE4 541 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 TCEAL6Q6IPX3 200 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 Q6ZS52 159 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 LRRC18Q8N456 261 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 LINC01555Q8NAE3 123 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 HDAC8Q9BY41 377 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 OR11A1Q9GZK7 315 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 FBXO34Q9NWN3 711 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 C14orf166Q9Y224 244 aaKnown RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 FITM1A5D6W6 292 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 SERINC4A6NH21 518 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 OTOL1A6NHN0 477 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 M0R082 166 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 LCATP04180 440 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 GFERP55789 205 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 EEF1A2Q05639 463 aaKnown RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 SFXN5Q8TD22 340 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 RNF170Q96K19 258 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 ZNF442Q9H7R0 627 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 CGGBP1Q9UFW8 167 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 TP53I11O14683 189 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 SSX5O60225 188 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 KCNJ13O60928 360 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 HIST1H1CP16403 213 aaKnown RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 ELK1P19419 428 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 LTBQ06643 244 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 ZNF616Q08AN1 781 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 TMEM52BQ4KMG9 183 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 LRRC56Q8IYG6 542 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-201ENST00000320081 PM20D2Q8IYS1 436 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 CD300LFQ8TDQ1 290 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 FBXL4Q9UKA2 621 aa15.22■□□□□ 0.03
CLIP4-201ENST00000320081 PNMTP11086 282 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 HOXC12P31275 282 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 ARHGDIBP52566 201 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 OR1D5P58170 312 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 TMEM176BQ3YBM2 270 aaPredicted RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 CORO6Q6QEF8 472 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 BEND4Q6ZU67 534 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 USP51Q70EK9 711 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 KCTD20Q7Z5Y7 419 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 CALHM3Q86XJ0 350 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 GPR32P1Q8NGA4 272 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 OR14L1PQ8NHC6 308 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 TSLPQ969D9 159 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 SEMA4CQ9C0C4 833 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 TSPAN10Q9H1Z9 355 aaPredicted RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 ABCA3Q99758 1704 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 SULT2B1O00204 365 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 CD6P30203 668 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 HOXA9P31269 272 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 VAMP2P63027 116 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 FAHD1Q6P587 224 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 COMMD7Q86VX2 200 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 C15orf40Q8WUR7 153 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 MRGPRX1Q96LB2 322 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 TSNAXQ99598 290 aaKnown RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 SMIM3Q9BZL3 60 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 MFFQ9GZY8 342 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 RNF32Q9H0A6 362 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 PTRH2Q9Y3E5 179 aaKnown RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 ZNF337Q9Y3M9 751 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 TRBV11-1A0A0K0K1C0 115 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 HNF4GQ14541 408 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 MFSD13AQ14CX5 517 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 OR10K2Q6IF99 312 aa15.21■□□□□ 0.03
CLIP4-201ENST00000320081 ZNF704Q6ZNC4 412 aaPredicted RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 C8orf33Q9H7E9 229 aaPredicted RBP15.21■□□□□ 0.03
CLIP4-201ENST00000320081 PCNTO95613 3336 aa15.21■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF736B4DX44 427 aaPredicted RBP15.2■□□□□ 0.02
CLIP4-201ENST00000320081 M0QYG6 137 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SBK2P0C263 348 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 CD34P28906 385 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms