RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 OR4C6Q8NH72 309 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 WDR36Q8NI36 951 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 CEP76Q8TAP6 659 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ADAMTS18Q8TE60 1221 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZC3H10Q96K80 434 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 VSTM2LQ96N03 204 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 LMF2Q9BU23 707 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 CAPN10Q9HC96 672 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MBD2Q9UBB5 411 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 NDRG3Q9UGV2 375 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MEIKINA0A087WXM9 373 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 A0A1W2PQM1 296 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 CPSF4LA6NMK7 179 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 M0R233 179 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 OR10H3O60404 316 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ADRA2AP08913 450 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 PRG2P13727 222 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MMP11P24347 488 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 CRISP1P54107 249 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MLLT11Q13015 90 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 HNRNPA0Q13151 305 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SNAPC1Q16533 368 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZSCAN1Q8NBB4 408 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 OR4K5Q8NGD3 323 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 TEX47Q8TBZ9 253 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF501Q96CX3 271 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ARSGQ96EG1 525 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ERMAPQ96PL5 475 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZCCHC4Q9H5U6 513 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 TXNL4BQ9NX01 149 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 PURGQ9UJV8 347 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MGAT4BQ9UQ53 548 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MRPS33Q9Y291 106 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 NPTNQ9Y639 398 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 COL5A1P20908 1838 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-201ENST00000317677 A0A087WUU8 490 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 BLACEA4D250 179 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 AIPO00170 330 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 AKAP8O43823 692 aaKnown RBP11.97□□□□□ -0.49
CPNE1-201ENST00000317677 BRINP1O60477 761 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 STX11O75558 287 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 SOX14O95416 240 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 THBS1P07996 1170 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 GAAP10253 952 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 RPL35P42766 123 aaKnown RBP11.97□□□□□ -0.49
CPNE1-201ENST00000317677 TGM4P49221 684 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 RAB13P51153 203 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 HSD17B7P56937 341 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 FUT7Q11130 342 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 DOC2BQ14184 412 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 CSRP2Q16527 193 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF321PQ8N8H1 164 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF615Q8N8J6 731 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 BVESQ8NE79 360 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 TSLPQ969D9 159 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 DGAT2Q96PD7 388 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 MS4A7Q9GZW8 240 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF768Q9H5H4 540 aaKnown RBP11.97□□□□□ -0.49
CPNE1-201ENST00000317677 IMPAD1Q9NX62 359 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 TAS2R16Q9NYV7 291 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 SUSD2Q9UGT4 822 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF222Q9UK12 451 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 ERVK-19Q9WJR5 959 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
CPNE1-201ENST00000317677 CPED1A4D0V7 1026 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CLDN4O14493 209 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 OSMP13725 252 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 HTR2AP28223 471 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 ARL4DP49703 201 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 RAG2P55895 527 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 RGS8P57771 180 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-201ENST00000317677 SMIM11AP58511 58 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 FOXK2Q01167 660 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 SLC27A4Q6P1M0 643 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CNIH2Q6PI25 160 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 MED25Q71SY5 747 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 NKAIN4Q8IVV8 208 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 PROKR2Q8NFJ6 384 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 RBM18Q96H35 190 aaKnown RBP11.96□□□□□ -0.49
CPNE1-201ENST00000317677 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 MCHR1Q99705 422 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 OR51J1Q9H342 316 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 GAREM1Q9H706 876 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 SLC25A19Q9HC21 320 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 B3GAT2Q9NPZ5 323 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CLN6Q9NWW5 311 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 COPZ2Q9P299 210 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CTSFQ9UBX1 484 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 NDOR1Q9UHB4 597 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CYB5R1Q9UHQ9 305 aa11.96□□□□□ -0.49
CPNE1-201ENST00000317677 CDV3Q9UKY7 258 aaKnown RBP11.96□□□□□ -0.49
CPNE1-201ENST00000317677 SEC16AO15027 2179 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 IGKV3D-11A0A0A0MRZ8 115 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 LINC00587B1AMM8 73 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 H7C2Y5 167 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 SSX5O60225 188 aa11.96□□□□□ -0.5
CPNE1-201ENST00000317677 PRKNO60260 465 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms