RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 VPS26AO75436 327 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 RHOBTB1O94844 696 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CD160O95971 181 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CA3P07451 260 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 PIRTP0C851 137 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SFTPCP11686 197 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CEBPBP17676 345 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 IMPDH1P20839 514 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CD9P21926 228 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 EDNRAP25101 427 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 HOXA9P31269 272 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 HMGCLP35914 325 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 PTGER3P43115 390 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 RGRP47804 291 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SLC6A8P48029 635 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 NUMBP49757 651 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 STC1P52823 247 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 ATP6V0D1P61421 351 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 RPS27AP62979 156 aaKnown RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 KCNJ2P63252 427 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SCGB2A2Q13296 93 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 DMC1Q14565 340 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 TCHHL1Q5QJ38 904 aaPredicted RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SEL1L3Q68CR1 1132 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 EPGNQ6UW88 154 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CERS6Q6ZMG9 384 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF573Q86YE8 665 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 MFSD6LQ8IWD5 586 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CCNYL1Q8N7R7 359 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF781Q8N8C0 355 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CHDHQ8NE62 594 aaPredicted RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 OR13C4Q8NGS5 318 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 STAG3L4Q8TBR4 150 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 TMEM190Q8WZ59 177 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 ISG20Q96AZ6 181 aaKnown RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 OTUB2Q96DC9 234 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CMTM5Q96DZ9 223 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 EBF4Q9BQW3 602 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 DGCR6LQ9BY27 220 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 NMNAT2Q9BZQ4 307 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 NMUR2Q9GZQ4 415 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 COG4Q9H9E3 785 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 KLK11Q9UBX7 282 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CHRNA9Q9UGM1 479 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 BAIAP2L1Q9UHR4 511 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 LAMP5Q9UJQ1 280 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 TMCO1Q9UM00 188 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 U3KQV3 271 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 A0A087WZY1 265 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 LOC390937A0A1W2PQ73 354 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 E5RI56 91 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 C5orf67F2Z3F1 127 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 K7ERQ8 282 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF749O43361 778 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 KCNAB3O43448 404 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 DUS4LO95620 317 aaKnown RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 POP4O95707 220 aaKnown RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 KRT16P08779 473 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 HIST1H2AGP0C0S8 130 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF7P17097 686 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 NCF2P19878 526 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 CD70P32970 193 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF140P52738 457 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 DHODHQ02127 395 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 PDZK1IP1Q13113 114 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ADPRMQ3LIE5 342 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ANKDD1AQ495B1 522 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 DNAL1Q4LDG9 190 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 C17orf64Q86WR6 236 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 OR2AP1Q8NGE2 309 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 OR4D10Q8NGI6 311 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 RHEBL1Q8TAI7 183 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 PIH1D2Q8WWB5 315 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 TMEM37Q8WXS4 190 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 HIST1H2ACQ93077 130 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 LRR1Q96L50 414 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF641Q96N77 438 aaPredicted RBP3.39□□□□□ -1.87
SMCO3-201ENST00000316048 CCDC28BQ9BUN5 200 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 BBS2Q9BXC9 721 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 TBC1D10AQ9BXI6 508 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 DERL2Q9GZP9 239 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 HOXD1Q9GZZ0 328 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 WDR13Q9H1Z4 485 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 IL17CQ9P0M4 197 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 MGAT4BQ9UQ53 548 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF175Q9Y473 711 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 MIA3Q5JRA6 1907 aa3.39□□□□□ -1.87
SMCO3-201ENST00000316048 A0A0J9YYE9 177 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 C1orf232A0A0U1RR37 186 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 FAM230AA0A1W2PPH8 454 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 SYCE1LA8MT33 242 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 A8MT66 165 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF724A8MTY0 619 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 NEDD8-MDP1E9PL57 170 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms