RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GNG2P59768 71 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 SELENOVP59797 346 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 SLC35A2P78381 396 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 SQSTM1Q13501 440 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 PRICKLE4Q2TBC4 344 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 CTU2Q2VPK5 515 aaKnown RBP12.55□□□□□ -0.4
DDX54-202ENST00000314045 PIGQQ9BRB3 760 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ATG5Q9H1Y0 275 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 DIMT1Q9UNQ2 313 aaKnown RBP12.55□□□□□ -0.4
DDX54-202ENST00000314045 GREB1Q4ZG55 1949 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 CCDC187A0A096LP49 1063 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 A0A1W2PS29 197 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 LRRTM2O43300 516 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 CAPNS1P04632 268 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 MAKP20794 623 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 EVI2BP34910 448 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 TPTEP56180 551 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 RELAQ04206 551 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 FAM26EQ8N5C1 309 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 GPR32P1Q8NGA4 272 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 HOXB13Q92826 284 aaPredicted RBP12.55□□□□□ -0.4
DDX54-202ENST00000314045 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 FAM210AQ96ND0 272 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 GABARAPL3Q9BY60 117 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 FN3KQ9H479 309 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 M0R082 166 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 ZNF593O00488 134 aaPredicted RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 PUDPQ08623 228 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 OCLNQ16625 522 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 HES5Q5TA89 166 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 H1FNTQ75WM6 255 aaPredicted RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 TMEM17Q86X19 198 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 ZNF417Q8TAU3 575 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 RFT1Q96AA3 541 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 ZNF764Q96H86 408 aaPredicted RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 ZNF587Q96SQ5 575 aaPredicted RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 OR11A1Q9GZK7 315 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 EEF1E1O43324 174 aaKnown RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 OPRL1P41146 370 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 LSSP48449 732 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 PPP5CP53041 499 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 MALLQ13021 153 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 AAED1Q7RTV5 226 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 ZPBPQ9BS86 351 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 ERVMER34-1Q9H9K5 563 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 HINT3Q9NQE9 182 aaKnown RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 POLHQ9Y253 713 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 SIP14410 1827 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 MGAMO43451 1857 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 DCDC2BA2VCK2 349 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
DDX54-202ENST00000314045 RFPL3O75679 317 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 DRD5P21918 477 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 HOXD12P35452 270 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 POU3F4P49335 361 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 PMS2CLQ68D20 193 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 PWWP2BQ6NUJ5 590 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 SLC15A4Q8N697 577 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 OR52I1Q8NGK6 324 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 OR5M1Q8NGP8 315 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 GIMAP5Q96F15 307 aa12.54□□□□□ -0.4
DDX54-202ENST00000314045 MTRF1O75570 445 aaKnown RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 RBBP9O75884 186 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 WNT1P04628 370 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CT62P0C5K7 136 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CD79AP11912 226 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CASP6P55212 293 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ZXDCQ2QGD7 858 aaPredicted RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 RHBDD2Q6NTF9 364 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TIGD4Q8IY51 512 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 URM1Q9BTM9 101 aaKnown RBP12.53□□□□□ -0.4
DDX54-202ENST00000314045 ENKD1Q9H0I2 346 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 EMC3Q9P0I2 261 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 CLEC2DQ9UHP7 191 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 HHLA2Q9UM44 414 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 ADAM18Q9Y3Q7 739 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 KLRC4-KLRK1H3BQV0 150 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 AKR7A3O95154 331 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 MT-CO3P00414 261 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 PGAM2P15259 253 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 SPCS2Q15005 226 aa12.53□□□□□ -0.4
DDX54-202ENST00000314045 TMEM244Q5VVB8 128 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms