RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 WDFY1Q8IWB7 410 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 LRRC75A-AS1Q8N1F1 130 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 KDM8Q8N371 416 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 KBTBD8Q8NFY9 601 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 OR6T1Q8NGN1 323 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 AKAP1Q92667 903 aaKnown RBP eCLIP12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC41A3Q96GZ6 507 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 TRIM2Q9C040 744 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 NELFAQ9H3P2 528 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 MED4Q9NPJ6 270 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 ASB6Q9NWX5 421 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 SHISA9B4DS77 424 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 FMO6PO60774 539 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SERPINB7O75635 380 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 AHSA1O95433 338 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 CD99P14209 185 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 MDH1P40925 334 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SELENOPP49908 381 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 CDH12P55289 794 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 RGS8P57771 180 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 STK11Q15831 433 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 VMACQ2NL98 169 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 P2RY8Q86VZ1 359 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SNX32Q86XE0 403 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 OR8J3Q8NGG0 315 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 DNAJA4Q8WW22 397 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 PIGTQ969N2 578 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF583Q96ND8 569 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF607Q96SK3 696 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 CCL19Q99731 98 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 TAPBPLQ9BX59 468 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 GSX2Q9BZM3 304 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 PCDHAC1Q9H158 963 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF701Q9NV72 531 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 RNF115Q9Y4L5 304 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ROS1P08922 2347 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 A0A1W2PR80 420 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ELOA3DA6NLF2 546 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 M0R082 166 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 OVOL3O00110 214 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 MRASO14807 208 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 TRAF3IP2O43734 574 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 VAMP5O95183 116 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 HPRP00739 348 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 BGLAPP02818 100 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 C8BP07358 591 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SOD3P08294 240 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 PTNP21246 168 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SPOCK1Q08629 439 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 PGGHGQ32M88 737 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 FAM69AQ5T7M9 428 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 AAED1Q7RTV5 226 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 GPAT4Q86UL3 456 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 UBE2J2Q8N2K1 259 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 BHLHE22Q8NFJ8 381 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 OR6S1Q8NH40 331 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 MOGAT1Q96PD6 335 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF426Q9BUY5 554 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 ARMCX1Q9P291 453 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 RASD1Q9Y272 281 aa12.81□□□□□ -0.36
PPP1CA-201ENST00000312989 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 LOC100653049A0A140TA62 436 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 BBIP1A8MTZ0 92 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 UPK3AO75631 287 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 KRT34O76011 436 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 MPGP29372 298 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 GRPRP30550 384 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF672Q499Z4 452 aaPredicted RBP12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 Q5PR19 223 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 SWT1Q5T5J6 900 aaKnown RBP12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 C9orf135Q5VTT2 229 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 C8orf82Q6P1X6 216 aaPredicted RBP12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 C5orf46Q6UWT4 87 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 ADPRHL1Q8NDY3 354 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 OR52N5Q8NH56 324 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC25A36Q96CQ1 311 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC47A1Q96FL8 570 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 EVA1AQ9H8M9 152 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC17A5Q9NRA2 495 aa12.8□□□□□ -0.36
PPP1CA-201ENST00000312989 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC22A2O15244 555 aa12.79□□□□□ -0.36
PPP1CA-201ENST00000312989 CLOCKO15516 846 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms