RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CACNG6Q9BXT2 260 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 WDR55Q9H6Y2 383 aaPredicted RBP7.15□□□□□ -1.26
TPM3-203ENST00000312970 YAE1D1Q9NRH1 226 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 THAP1Q9NVV9 213 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.15□□□□□ -1.26
TPM3-203ENST00000312970 SLC9A8Q9Y2E8 581 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 FLVCR1Q9Y5Y0 555 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 GPR45Q9Y5Y3 372 aa7.15□□□□□ -1.26
TPM3-203ENST00000312970 V9GYY5 206 aaPredicted RBP7.15□□□□□ -1.26
TPM3-203ENST00000312970 SVEP1Q4LDE5 3571 aa7.15□□□□□ -1.27
TPM3-203ENST00000312970 ZC3H12DA2A288 527 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 FAM234BA2RU67 622 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 CDHR4A6H8M9 788 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 SLCO1B7G3V0H7 640 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 SLC22A3O75751 556 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 WNT11O96014 354 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 GHRHP01286 108 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 BMP4P12644 408 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 IDO1P14902 403 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 EPHA3P29320 983 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 APOBEC3AP31941 199 aaPredicted RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 ACAA2P42765 397 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 NUDT6P53370 316 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 PRPS1P60891 318 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 COPZ1P61923 177 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 IRX1P78414 480 aaPredicted RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 CHRNB3Q05901 458 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 CEACAM7Q14002 265 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ZSWIM7Q19AV6 140 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 OTUD3Q5T2D3 398 aaPredicted RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 MRPL2Q5T653 305 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 TSPO2Q5TGU0 170 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 C9orf135Q5VTT2 229 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ATG16L1Q676U5 607 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 TMEM225Q6GV28 225 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 C11orf71Q6IPW1 123 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ZNF544Q6NX49 715 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 AAED1Q7RTV5 226 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 HDXQ7Z353 690 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ABHD12BQ7Z5M8 362 aaPredicted RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 ALPK2Q86TB3 2170 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 HIPK1Q86Z02 1210 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 PHC2Q8IXK0 858 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 C17orf78Q8N4C9 275 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 TMEM99Q8N816 258 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ZIC4Q8N9L1 334 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 C1orf162Q8NEQ5 155 aaPredicted RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 OR10H5Q8NGA6 315 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 OR52P1PQ8NH57 321 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 PNPT1Q8TCS8 783 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 TRIM63Q969Q1 353 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 TMEM45BQ96B21 275 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ZBTB9Q96C00 473 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 SF3B5Q9BWJ5 86 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 AMBRA1Q9C0C7 1298 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 HEATR1Q9H583 2144 aaKnown RBP7.14□□□□□ -1.27
TPM3-203ENST00000312970 ARMC7Q9H6L4 198 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 FKRPQ9H9S5 495 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 SLC17A5Q9NRA2 495 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 SLC7A10Q9NS82 523 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 RLIMQ9NVW2 624 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 CALML5Q9NZT1 146 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 AMDHD2Q9Y303 409 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 ATP23Q9Y6H3 246 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 PMF1-BGLAPU3KQ54 211 aa7.14□□□□□ -1.27
TPM3-203ENST00000312970 IGHV4-30-2A0A087WSY4 118 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 A0A0G2JPF8 293 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 LIPT2A6NK58 231 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 AQP7P3A6NL99 342 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 A8MV72 311 aaPredicted RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 A8MVM7 634 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 HNRNPCL2B2RXH8 293 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 HNRNPCL3B7ZW38 293 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 HNRNPCL1O60812 293 aaKnown RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 SNNO75324 88 aaPredicted RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 KRT33AO76009 404 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 AKR7A3O95154 331 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 VAMP5O95183 116 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 ANP32DO95626 131 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 IFNA2P01563 188 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 GSTP1P09211 210 aaKnown RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 TFPTP0C1Z6 253 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 GKN3PP0CG01 181 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 ZCCHC18P0CG32 403 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 HNRNPCL4P0DMR1 293 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 KITP10721 976 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 PAX7P23759 505 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 MPGP29372 298 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 CRATP43155 626 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 MVDP53602 400 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 CRISP3P54108 245 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 SPOCK1Q08629 439 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 KRT72Q14CN4 511 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 LARS2Q15031 903 aaKnown RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 OR7A5Q15622 319 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 MAPK11Q15759 364 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 LIN52Q52LA3 116 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 PDCD4Q53EL6 469 aaKnown RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 WBP2NLQ6ICG8 309 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms