RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 FAM74A1Q5RGS3 127 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 ELP2Q6IA86 826 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 BRIX1Q8TDN6 353 aaKnown RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 TRIM43Q96BQ3 446 aaPredicted RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 MS4A4EQ96PG1 132 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 PRSS27Q9BQR3 290 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 GXYLT2A0PJZ3 443 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 AP3S2P59780 193 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ARHGAP19Q14CB8 494 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TRAM1Q15629 374 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 AMZ1Q400G9 498 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 C4orf46Q504U0 113 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TMEM35AQ53FP2 167 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 LHFPL5Q8TAF8 219 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 RERGQ96A58 199 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 RBM18Q96H35 190 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 SDF2Q99470 211 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TMEM74BQ9NUR3 256 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 KIF26AQ9ULI4 1882 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 FRYLO94915 3013 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 DENND4CQ5VZ89 1909 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TRIM77I1YAP6 450 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 GPANK1O95872 356 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 CA3P07451 260 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TMIGD3P0DMS9 266 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 HIST1H1CP16403 213 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 SRMP19623 302 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ZNF136P52737 540 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 FBXW4P57775 412 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 RPS15P62841 145 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TRA2BP62995 288 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ERVK-25P63136 954 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 DMKNQ6E0U4 476 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 SLC35F2Q8IXU6 374 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ESX1Q8N693 406 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 NR4A3Q92570 626 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 MOAP1Q96BY2 351 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 NMNAT3Q96T66 252 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 CNN2Q99439 309 aaKnown RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 PCDHGA5Q9Y5G8 931 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 G3V3Q6 166 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 J3QRE1 110 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 KLF4O43474 513 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 NDUFS1P28331 727 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 CMPK1P30085 196 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 HSD17B2P37059 387 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 CDK5R1Q15078 307 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 KDM8Q8N371 416 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 TTLQ8NG68 377 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 DVL3Q92997 716 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 LINC00615Q96LM1 132 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 ANKRD19PQ9H560 264 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 NRIP3Q9NQ35 241 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
NPAS4-201ENST00000311034 SIGLEC7Q9Y286 467 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 KCNMB2Q9Y691 235 aa12.47□□□□□ -0.41
NPAS4-201ENST00000311034 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 CDK2P24941 298 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 PPP1CAP62136 330 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 DCST2Q5T1A1 773 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 HACD4Q5VWC8 232 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 LMF1Q96S06 567 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 LMAN2LQ9H0V9 348 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 HRASLS2Q9NWW9 162 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 SOHLH2Q9NX45 425 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 TBC1D29Q9UFV1 150 aa12.46□□□□□ -0.41
NPAS4-201ENST00000311034 B4DGG1 531 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 ZP3P21754 424 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 IL32P24001 234 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.42
NPAS4-201ENST00000311034 SORDQ00796 357 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.42
NPAS4-201ENST00000311034 PON3Q15166 354 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 CST6Q15828 149 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 TMUB2Q71RG4 321 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 OR2L3Q8NG85 312 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 SMARCD2Q92925 531 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 SMIM19Q96E16 107 aa12.46□□□□□ -0.42
NPAS4-201ENST00000311034 KLHL15Q96M94 604 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms