RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 NHLRC1Q6VVB1 395 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 CCDC36Q8IYA8 594 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 SDR16C5Q8N3Y7 309 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ADAMTS14Q8WXS8 1223 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 MMABQ96EY8 250 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 MARVELD1Q9BSK0 173 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 AICDAQ9GZX7 198 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 C17orf113A0A1B0GUU1 675 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 DUXAA6NLW8 204 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 CCSO14618 274 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 FGF17O60258 216 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 WNT1P04628 370 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 HOXB9P17482 250 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 SELENOPP49908 381 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 C1orf189Q5VU69 101 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ZAR1Q86SH2 424 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 TBC1D20Q96BZ9 403 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 TGM7Q96PF1 710 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ACTR6Q9GZN1 396 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 NOX4Q9NPH5 578 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 CENPMQ9NSP4 180 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ARPC4-TTLL3A0A0A6YYG9 625 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM129A0AVI4 362 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 HRKO00198 91 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 CDC42EP2O14613 210 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 POU3F2P20265 443 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 DCTDP32321 178 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF33BQ06732 778 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 RUNX2Q13950 521 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF628Q5EBL2 1059 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 UNQ6126/PRO20091Q6UXV3 157 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 PRSS42Q7Z5A4 293 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 GPALPP1Q8IXQ4 340 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 CSNK1A1LQ8N752 337 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 BPIFA2Q96DR5 249 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZC3H10Q96K80 434 aaKnown RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 HS6ST2Q96MM7 605 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TNFRSF13CQ96RJ3 184 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 NXF2Q9GZY0 626 aaKnown RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 WASH6PQ9NQA3 447 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF593O00488 134 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 IMPA2O14732 288 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 OR8G3PP0DMU2 310 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ENPP1P22413 925 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TEKQ02763 1124 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 KCNAB1Q14722 419 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 UBXN2BQ14CS0 331 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 MEPCEQ7L2J0 689 aaKnown RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TMPRSS9Q7Z410 1059 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 LRRC56Q8IYG6 542 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM239Q8WW34 195 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF350Q9GZX5 532 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM231Q9H6L2 316 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 EMC7Q9NPA0 242 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 LYARQ9NX58 379 aaKnown RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 DCDC2BA2VCK2 349 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 AMY2AP04746 511 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 MAKP20794 623 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 MAP3K8P41279 467 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 GK2Q14410 553 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 LGALSLQ3ZCW2 172 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 OR2T4Q8NH00 348 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 WDR92Q96MX6 357 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 WDFY2Q96P53 400 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 ACTR10Q9NZ32 417 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 MSRAQ9UJ68 235 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 COL6A3P12111 3177 aa11.68□□□□□ -0.54
RETREG3-201ENST00000309428 F5H5P2 479 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CLEC3AO75596 197 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 AKR1C4P17516 323 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 MAOAP21397 527 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PCBP3P57721 371 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CLVS2Q5SYC1 327 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 SLC6A19Q695T7 634 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 TIGD3Q6B0B8 471 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM81Q6P7N7 255 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 GSG1LQ6UXU4 331 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 IL17RCQ8NAC3 791 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF511Q8NB15 262 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 C17orf47Q8NEP4 570 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PAQR8Q8TEZ7 354 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 KIAA1143Q96AT1 154 aaPredicted RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 TSSK2Q96PF2 358 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 HCAR1Q9BXC0 346 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ULBP3Q9BZM4 244 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PRDM7Q9NQW5 492 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ADAM18Q9Y3Q7 739 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms