RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 DAZAP1Q96EP5 407 aaKnown RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 BBC3Q96PG8 261 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 STACQ99469 402 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ACTRT3Q9BYD9 372 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 TINAGL1Q9GZM7 467 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 RGCCQ9H4X1 137 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 SH2D2AQ9NP31 389 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 DUSP22Q9NRW4 184 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC6A13Q9NSD5 602 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 FAM118AQ9NWS6 357 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CLEC5AQ9NY25 188 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 KCNN3Q9UGI6 736 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 B3GNT3Q9Y2A9 372 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ARL2BPQ9Y2Y0 163 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NDUFAF1Q9Y375 327 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CSAG2Q9Y5P2 127 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NINQ8N4C6 2090 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 A0A096LPI6 279 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 TRBV5-3A0A0A0MS03 114 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 TRAV17A0A0B4J275 112 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 RAB19A4D1S5 217 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 KDM4EB2RXH2 506 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 B8ZZF3 427 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 FAM47E-STBD1D6RA91 191 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 HS3ST1O14792 307 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 LANCL1O43813 399 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 F10P00742 488 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 IL2RAP01589 272 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SCG5P05408 212 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 KRT16P08779 473 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 TFPTP0C1Z6 253 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ACP2P11117 423 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 UCP1P25874 307 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 G0S2P27469 103 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PIGAP37287 484 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CASRP41180 1078 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PRPS1P60891 318 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SPCS3P61009 180 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZNF155Q12901 538 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 TP53BP2Q13625 1128 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 OR1C1Q15619 314 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZNHIT3Q15649 155 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 USF2Q15853 346 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 SPDYE7PQ495Y7 208 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 GTDC1Q4AE62 458 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 COQ5Q5HYK3 327 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PAGE3Q5JUK9 113 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SPANXN2Q5MJ10 180 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CARD17Q5XLA6 110 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SAXO2Q658L1 398 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SPINK14Q6IE38 97 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CDC73Q6P1J9 531 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 DLEU7Q6UYE1 221 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZNF621Q6ZSS3 439 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 WDR53Q7Z5U6 358 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 RTN4RL2Q86UN3 420 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 FOXRED2Q8IWF2 684 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC34A3Q8N130 599 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 OR4N2Q8NGD1 307 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 OR5AK3PQ8NH89 298 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 FAM110BQ8TC76 370 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZFP90Q8TF47 636 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PNPLA2Q96AD5 504 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 C3orf49Q96BT1 292 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SCMH1Q96GD3 660 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 C16orf58Q96GQ5 468 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SIGLEC12Q96PQ1 595 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC35A5Q9BS91 424 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 TP63Q9H3D4 680 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 PIGUQ9H490 435 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 Q9N2J8 555 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 EQTNQ9NQ60 294 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ANKRD10Q9NXR5 420 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ARMCX1Q9P291 453 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC25A10Q9UBX3 287 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 DUXAA6NLW8 204 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 FBP2O00757 339 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 ADAMDEC1O15204 470 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 TSPAN2O60636 221 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 SLC25A12O75746 678 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 MATN1P21941 496 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 POU1F1P28069 291 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 GABRA3P34903 492 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 SOAT1P35610 550 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 RPS5P46782 204 aaKnown RBP7.48□□□□□ -1.21
CHD6-201ENST00000309279 TMED10P49755 219 aaKnown RBP7.48□□□□□ -1.21
CHD6-201ENST00000309279 MVDP53602 400 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 PNLIPRP2P54317 469 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 PER3P56645 1201 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 TXNL4AP83876 142 aaKnown RBP7.48□□□□□ -1.21
CHD6-201ENST00000309279 OC90Q02509 493 aaPredicted RBP7.48□□□□□ -1.21
CHD6-201ENST00000309279 SPOCK1Q08629 439 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 KLRB1Q12918 225 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 ZNF169Q14929 603 aaPredicted RBP7.48□□□□□ -1.21
CHD6-201ENST00000309279 NNATQ16517 81 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 DUSP5Q16690 384 aa7.48□□□□□ -1.21
CHD6-201ENST00000309279 PLEKHN1Q494U1 663 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms