RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 KIAA0895LQ68EN5 471 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 KDELC1Q6UW63 502 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 RBMXL3Q8N7X1 1067 aaKnown RBP11.77□□□□□ -0.53
USP38-201ENST00000307017 TEX37Q96LM6 180 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 TNFRSF13CQ96RJ3 184 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 C20orf85Q9H1P6 137 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 DCTN6O00399 190 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 OR2J3O76001 311 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 BMP2P12643 396 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 CD6P30203 668 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SLC5A2P31639 672 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 PCGF2P35227 344 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 GDNFP39905 211 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 GIPRP48546 466 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 CSNK1A1P48729 337 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 VRK3Q8IV63 474 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 ZFP62Q8NB50 900 aaPredicted RBP11.77□□□□□ -0.53
USP38-201ENST00000307017 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 B4GALT7Q9UBV7 327 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 ABCC6O95255 1503 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 CA12O43570 354 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 KITLGP21583 273 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 BMP5P22003 454 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 FAM111BQ6SJ93 734 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SLC41A2Q96JW4 573 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 NOX4Q9NPH5 578 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SLC2A4RGQ9NR83 387 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SNX11Q9Y5W9 270 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SPATA31D1Q6ZQQ2 1576 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 TMX2-CTNND1H3BSU7 103 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PI3P19957 117 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 P2RX1P51575 399 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 OR8B8Q15620 311 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 FAM69AQ5T7M9 428 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 ATF6BQ99941 703 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 RARRES3Q9UL19 164 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 LRRTM2O43300 516 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 ITGAMP11215 1152 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 RPS15P62841 145 aaKnown RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 SYT9Q86SS6 491 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 GATA6Q92908 595 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 FGGYQ96C11 551 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 KATNB1Q9BVA0 655 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 NRSN2Q9GZP1 204 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 A6NHS1 94 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 THBS1P07996 1170 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 RHOUQ7L0Q8 258 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PM20D2Q8IYS1 436 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SNIP1Q8TAD8 396 aaKnown RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 TMEM163Q8TC26 289 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 LIPT1Q9Y234 373 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 IGHV3-15A0A0B4J1V0 119 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 B4DXG7 233 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 MSTNO14793 375 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 BCAT2O15382 392 aaPredicted RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 SYPP08247 313 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 HSD17B1P14061 328 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 EFNA3P52797 238 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 MTCP1P56278 107 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 EDDM3BP56851 147 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 BAMBIQ13145 260 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 HES1Q14469 280 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 CLLU1OSQ5K130 101 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 CORO6Q6QEF8 472 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 CPXM2Q8N436 756 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 ARRDC3Q96B67 414 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 VN1R3Q9BXE9 311 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 SLC19A3Q9BZV2 496 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 ERVMER34-1Q9H9K5 563 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PIAS3Q9Y6X2 628 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 A0A1B0GTW7 788 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 TPOP07202 933 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PCSK2P16519 638 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 DDCP20711 480 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 RPE65Q16518 533 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 PSMF1Q92530 271 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
USP38-201ENST00000307017 OR10A5Q9H207 317 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 LIN7BQ9HAP6 207 aa11.76□□□□□ -0.53
USP38-201ENST00000307017 TMEM82A0PJX8 343 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 FTCDNL1E5RQL4 147 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 DPM1O60762 260 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 RNF224P0DH78 156 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 LINC00696Q6ZRV3 163 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 PXT1Q8NFP0 134 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 SGK3Q96BR1 496 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TIMM8AO60220 97 aaPredicted RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 TMEM201Q5SNT2 666 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms