RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CSF3P09919 207 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 HNRNPA2B1P22626 353 aaKnown RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 GZMKP49863 264 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 RIN1Q13671 783 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 OTUD1Q5VV17 481 aaPredicted RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 TMEM200AQ86VY9 491 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 SENP5Q96HI0 755 aaPredicted RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 OPALINQ96PE5 141 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 DDOQ99489 341 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 CHST8Q9H2A9 424 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 SPATA6Q9NWH7 488 aaPredicted RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 A0A0A6YYJ9 748 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 ARRDC5A6NEK1 342 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 CFIP05156 583 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 ALKBH1Q13686 389 aaKnown RBP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF542PQ5EBM4 170 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 UNQ6126/PRO20091Q6UXV3 157 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL3A1-201ENST00000304636 DPY19L2P2Q6ZN68 376 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 DEFB119Q8N690 84 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 LDAHQ9H6V9 325 aa11.93□□□□□ -0.5
COL3A1-201ENST00000304636 RAC2P15153 192 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 GABRR1P24046 479 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 OR7A5Q15622 319 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 MPEG1Q2M385 716 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 KLHDC8BQ8IXV7 354 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 OR2A12Q8NGT7 310 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 LINC01599Q8WXQ3 324 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 WDR76Q9H967 626 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 FTCDNL1E5RQL4 147 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 E9PI62 339 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 F5H5K5 113 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 HOXC11O43248 304 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 F13BP05160 661 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 NPPBP16860 134 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 EPHA1P21709 976 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 TGM1P22735 817 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 SLC35D3Q5M8T2 416 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 HEPHL1Q6MZM0 1159 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 PLXDC1Q8IUK5 500 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 LCATP04180 440 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 PRR22Q8IZ63 422 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 TCTE3Q8IZS6 198 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 FAM160A2Q8N612 972 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 OR56B1Q8NGI3 324 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 MR1Q95460 341 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 PDXPQ96GD0 296 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 RBM24Q9BX46 236 aaKnown RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 PRSS16Q9NQE7 514 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 TMEM200CA6NKL6 621 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 GJE1A6NN92 205 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF593O00488 134 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 WDPCPO95876 746 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 TEAD1P28347 426 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 FASLGP48023 281 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 RFLNAQ6ZTI6 216 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 LMNTD1Q8N9Z9 388 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF740Q8NDX6 193 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 FRZBQ92765 325 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 NMNAT3Q96T66 252 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 LPAR4Q99677 370 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 MED18Q9BUE0 208 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 SLC46A2Q9BY10 475 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 OR10A5Q9H207 317 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 OR10A2Q9H208 303 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 IKZF5Q9H5V7 419 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 CITO14578 2027 aa11.92□□□□□ -0.5
COL3A1-201ENST00000304636 MYH9P35579 1960 aaKnown RBP11.92□□□□□ -0.5
COL3A1-201ENST00000304636 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 H3BML4 177 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 EVX1P49640 407 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 UBE2KP61086 200 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 MFGE8Q08431 387 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 SLC14A1Q13336 389 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 RPE65Q16518 533 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 TECPR1Q7Z6L1 1165 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 SLC39A11Q8N1S5 342 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ST8SIA4Q92187 359 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 GPR174Q9BXC1 333 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 TCEAL2Q9H3H9 227 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 FANCFQ9NPI8 374 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF223Q9UK11 482 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 EFCAB7A8K855 629 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 GPR137BO60478 399 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 LGI1O95970 557 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms