RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CREB3L2Q70SY1 520 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 PATL1Q86TB9 770 aaKnown RBP23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 C17orf78Q8N4C9 275 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 SMYD1Q8NB12 490 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 OR10A6Q8NH74 314 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 FBXW5Q969U6 566 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 SLCO5A1Q9H2Y9 848 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 CXorf56Q9H5V9 222 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 SAR1AQ9NR31 198 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 TRAV36DV7A0A075B6V5 113 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 DPRXA6NFQ7 191 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 OR6C65A6NJZ3 312 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 M0QX08 132 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 NPPAP01160 153 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 PCGF2P35227 344 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 KLF10Q13118 480 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 OR1Q1Q15612 314 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 Q5PR19 223 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 SWT1Q5T5J6 900 aaKnown RBP23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 C1QTNF12Q5T7M4 302 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 PRSS57Q6UWY2 283 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 KRTAP1-3Q8IUG1 177 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 OR52N5Q8NH56 324 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 RNF217Q8TC41 542 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 IGFBPL1Q8WX77 278 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 PERPQ96FX8 193 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 PRR14Q9BWN1 585 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 GSX2Q9BZM3 304 aa23.26■■□□□ 1.31
CDKN2A-201ENST00000304494 A0A087WUJ7 227 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 A0A0B4J2E0 115 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 A0A1B0GX12 115 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 FMO6PO60774 539 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 FZD7O75084 574 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 KRT33AO76009 404 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 LGI1O95970 557 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 MPGP29372 298 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF672Q499Z4 452 aaPredicted RBP23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 NANOGP8Q6NSW7 305 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 KLHL17Q6TDP4 642 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 TMEM108Q6UXF1 575 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 OR8J3Q8NGG0 315 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 LILRB1Q8NHL6 650 aaPredicted RBP23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 TAAR8Q969N4 342 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 LRRC58Q96CX6 371 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 RADILQ96JH8 1075 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 EPYCQ99645 322 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 AMBRA1Q9C0C7 1298 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 NANOGQ9H9S0 305 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 DLL4Q9NR61 685 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 KLHL14Q9P2G3 628 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 SLC25A15Q9Y619 301 aa23.25■■□□□ 1.31
CDKN2A-201ENST00000304494 IGKV1D-42A0A075B6H8 117 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 MRASO14807 208 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 AIM2O14862 343 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 RIPPLY3P57055 190 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 SF3A3Q12874 501 aaKnown RBP eCLIP23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 MFSD13AQ14CX5 517 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 DUSP7Q16829 419 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 VMACQ2NL98 169 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 C9orf135Q5VTT2 229 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 REP15Q6BDI9 236 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 SLC26A7Q8TE54 656 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 RASSF5Q8WWW0 418 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 ARHGDIGQ99819 225 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 NPAP1Q9NZP6 1156 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 B3GALT5Q9Y2C3 310 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 AMDHD2Q9Y303 409 aa23.24■■□□□ 1.31
CDKN2A-201ENST00000304494 TPST2O60704 377 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 OPN1SWP03999 348 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 PAX1P15863 534 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF43P17038 809 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 PTH2RP49190 550 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 FOXG1P55316 489 aaPredicted RBP23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 EPHX4Q8IUS5 362 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 PCYOX1LQ8NBM8 494 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 KBTBD8Q8NFY9 601 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 OR6S1Q8NH40 331 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 OXGR1Q96P68 337 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 MCHR1Q99705 422 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 ECSITQ9BQ95 431 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 MGAT4BQ9UQ53 548 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 LAMP3Q9UQV4 416 aa23.23■■□□□ 1.31
CDKN2A-201ENST00000304494 M0R3H8 397 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 ABCD4O14678 606 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 SLC22A2O15244 555 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 PTAFRP25105 342 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 MDH1P40925 334 aaKnown RBP23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 SELENOPP49908 381 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 GZMMP51124 257 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 CDH12P55289 794 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 RPS4XP62701 263 aaKnown RBP23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 NRF1Q16656 503 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 NIPAL3Q6P499 406 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 ZNF613Q6PF04 617 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 H1FNTQ75WM6 255 aaPredicted RBP23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 SNX32Q86XE0 403 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 GPR32P1Q8NGA4 272 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 SMAP2Q8WU79 429 aaPredicted RBP23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 WFDC6Q9BQY6 131 aa23.22■■□□□ 1.31
CDKN2A-201ENST00000304494 SLC17A5Q9NRA2 495 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms