RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 HSMCR30P0CW71 290 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ICAM2P13598 275 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 CPEP16870 476 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 RPL4P36578 427 aaKnown RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 APOBEC1P41238 236 aaKnown RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 SERPINB10P48595 397 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 VBP1P61758 197 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 BDH1Q02338 343 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 LTBQ06643 244 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 TPBGQ13641 420 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 CRMP1Q14194 572 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 TOMM34Q15785 309 aaPredicted RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 SSX1Q16384 188 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 MOGQ16653 247 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ZNF791Q3KP31 576 aaPredicted RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 SLC35D3Q5M8T2 416 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 LCN1P1Q5VSP4 162 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 GPR139Q6DWJ6 353 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 OPN5Q6U736 354 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 MAMDC2Q7Z304 686 aaPredicted RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 ADGRG3Q86Y34 549 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 KLHL36Q8N4N3 616 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ACBD7Q8N6N7 88 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 C10orf53Q8N6V4 93 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 OR11G2Q8NGC1 345 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 THAP3Q8WTV1 239 aaPredicted RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 RPL3LQ92901 407 aaKnown RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 TAAR8Q969N4 342 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ZHX1-C8orf76Q96EF9 292 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 DDOQ99489 341 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 TEAD3Q99594 435 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 KLHDC3Q9BQ90 382 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 SIAEQ9HAT2 523 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 NDUFB11Q9NX14 153 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 ERVK13-1Q9NX77 482 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 PISDQ9UG56 409 aa10.89□□□□□ -0.67
TPM3-202ENST00000302206 YARS2Q9Y2Z4 477 aaKnown RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 CAB39Q9Y376 341 aaPredicted RBP10.89□□□□□ -0.67
TPM3-202ENST00000302206 HELZ2Q9BYK8 2649 aaKnown RBP10.88□□□□□ -0.67
TPM3-202ENST00000302206 NSG1A0A0A6YYJ2 146 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 TEX51A0A1B0GUA7 166 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 TMEM72A0PK05 275 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 LRRN3E7EW58 273 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ZNF208O43345 1280 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 OR2T1O43869 369 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 SUSD5O60279 629 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FZD7O75084 574 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 HIST1H1CP16403 213 aaKnown RBP10.88□□□□□ -0.67
TPM3-202ENST00000302206 PRKCAP17252 672 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NR4A1P22736 598 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ATP6V1E1P36543 226 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 PTGDSP41222 190 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 SLC25A1P53007 311 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NCS1P62166 190 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ACTC1P68032 377 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ACTA1P68133 377 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 GGTLC2Q14390 218 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 SSPNQ14714 243 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FAM69AQ5T7M9 428 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 TMEM164Q5U3C3 297 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FAM69BQ5VUD6 431 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FAM122BQ7Z309 247 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NANOGNBQ7Z5D8 188 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 CACTIN-AS1Q8N1I8 211 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ESX1Q8N693 406 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 AMER2Q8N7J2 671 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FAM98AQ8NCA5 519 aaKnown RBP10.88□□□□□ -0.67
TPM3-202ENST00000302206 OR4F15Q8NGB8 312 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 OR52E2Q8NGJ4 325 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 MOSPD2Q8NHP6 518 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NDNFQ8TB73 568 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 CT55Q8WUE5 264 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NTNG2Q96CW9 530 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 KTI12Q96EK9 354 aaPredicted RBP10.88□□□□□ -0.67
TPM3-202ENST00000302206 FRMD6Q96NE9 622 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 MOGAT1Q96PD6 335 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 SNX18Q96RF0 628 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 KATNB1Q9BVA0 655 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 NMNAT2Q9BZQ4 307 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 MED20Q9H944 212 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 PPP4R1LQ9P1A2 415 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 TCFL5Q9UL49 500 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
TPM3-202ENST00000302206 WIF1Q9Y5W5 379 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 A3GALT2U3KPV4 340 aa10.88□□□□□ -0.67
TPM3-202ENST00000302206 ITGA10O75578 1167 aa10.87□□□□□ -0.67
TPM3-202ENST00000302206 AHSA1O95433 338 aa10.87□□□□□ -0.67
TPM3-202ENST00000302206 HPP00738 406 aa10.87□□□□□ -0.67
TPM3-202ENST00000302206 INHBBP09529 407 aa10.87□□□□□ -0.67
TPM3-202ENST00000302206 SBK2P0C263 348 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms