RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 PAQR6Q6TCH4 344 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 PDCD1LG2Q9BQ51 273 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 METTL17Q9H7H0 456 aaPredicted RBP19.23■□□□□ 0.67
LTBP3-201ENST00000301873 ZMAT3Q9HA38 289 aaKnown RBP19.23■□□□□ 0.67
LTBP3-201ENST00000301873 SMCO3A2RU48 225 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 FTCDNL1E5RQL4 147 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 PPM1DO15297 605 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 SUSD5O60279 629 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 HTR3AP46098 478 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 POU4F3Q15319 338 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 LYPD4Q6UWN0 246 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 MEX3BQ6ZN04 569 aaKnown RBP19.23■□□□□ 0.67
LTBP3-201ENST00000301873 COMMD7Q86VX2 200 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 SGPP2Q8IWX5 399 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 PLAC1Q9HBJ0 212 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 PISDQ9UG56 409 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 LRP5O75197 1615 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 HMGN4O00479 90 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 LGI1O95970 557 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 RAB40ALP0C0E4 278 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 BEX5Q5H9J7 111 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 OPN5Q6U736 354 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 C12orf45Q8N5I9 185 aaPredicted RBP19.23■□□□□ 0.67
LTBP3-201ENST00000301873 RAB40AQ8WXH6 277 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 KCTD12Q96CX2 325 aaKnown RBP19.23■□□□□ 0.67
LTBP3-201ENST00000301873 NOX4Q9NPH5 578 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 SCN1AP35498 2009 aa19.23■□□□□ 0.67
LTBP3-201ENST00000301873 GLI3P10071 1580 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 BLACEA4D250 179 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 EVI2BP34910 448 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 GDNFP39905 211 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 LIM2P55344 173 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 OR5D18Q8NGL1 313 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ATOH1Q92858 354 aaPredicted RBP19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ZBTB8AQ96BR9 441 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 MKRN2Q9H000 416 aaKnown RBP19.22■□□□□ 0.67
LTBP3-201ENST00000301873 DUSP21Q9H596 190 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 CDH20Q9HBT6 801 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ALPK2Q86TB3 2170 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 TMEM179BQ7Z7N9 219 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 FRMD1Q8N878 549 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 TM9SF4Q92544 642 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 SDF2Q99470 211 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 SEMA6CQ9H3T2 930 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 UTS2O95399 124 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 IFNA2P01563 188 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 GDF1P27539 372 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 CAMLGP49069 296 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 MELKQ14680 651 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 RHEBQ15382 184 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 SHHQ15465 462 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 GLYATL2Q8WU03 294 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 PCNPQ8WW12 178 aaKnown RBP19.22■□□□□ 0.67
LTBP3-201ENST00000301873 RASD2Q96D21 266 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ZNF649Q9BS31 505 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 DUSP23Q9BVJ7 150 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 ZNF576Q9H609 170 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 COL18A1P39060 1754 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 TRBV5-4A0A0C4DH59 114 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 FUCA1P04066 466 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 CD1EP15812 388 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 PSMB1P20618 241 aaKnown RBP19.22■□□□□ 0.67
LTBP3-201ENST00000301873 SERPINA2P20848 420 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 HOXD12P35452 270 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 SLC41A2Q96JW4 573 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 VN1R3Q9BXE9 311 aa19.22■□□□□ 0.67
LTBP3-201ENST00000301873 CASP3P42574 277 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 MEP1BQ16820 701 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 LINC00346Q8IVM7 164 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 C11orf54Q9H0W9 315 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 PHIPQ8WWQ0 1821 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 CNOT1A5YKK6 2376 aaKnown RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 HOXB5P09067 269 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 DLSTP36957 453 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 GP2P55259 537 aaKnown RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 DPTQ07507 201 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 UNQ6126/PRO20091Q6UXV3 157 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 ESPNLQ6ZVH7 1005 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 OR6F1Q8NGZ6 308 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 OR56B4Q8NH76 319 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 MBOAT4Q96T53 435 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 C6orf106Q9H6K1 298 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 SLA2Q9H6Q3 261 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 ASF1BQ9NVP2 202 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 ZDBF2Q9HCK1 2354 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 SIGLEC6O43699 453 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 PRKNO60260 465 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 NID1P14543 1247 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 Q6ZNX1 250 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 TECPR1Q7Z6L1 1165 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 AGBL5Q8NDL9 886 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 ZNF285Q96NJ3 590 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 CCNL2Q96S94 520 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 PRRT1Q99946 306 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 C7orf50Q9BRJ6 194 aaKnown RBP19.21■□□□□ 0.67
LTBP3-201ENST00000301873 SGPP1Q9BX95 441 aa19.21■□□□□ 0.67
LTBP3-201ENST00000301873 KCNIP1Q9NZI2 227 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms