RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CMC2Q9NRP2 79 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 FAM86C2PA6NEL3 165 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 MCIDASD6RGH6 385 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 LANCL1O43813 399 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 VASNQ6EMK4 673 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 POMZP3Q6PJE2 187 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 KCNJ15Q99712 375 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 G6PC3Q9BUM1 346 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 ALG8Q9BVK2 526 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 MED28Q9H204 178 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 ATXN7L1Q9ULK2 861 aaPredicted RBP20.06■□□□□ 0.8
TPM4-201ENST00000300933 PCNX3Q9H6A9 2034 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 IGHA1P01876 353 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 HPGDP15428 266 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 MARCH9Q86YJ5 346 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 SPEM1Q8N4L4 309 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 ACBD7Q8N6N7 88 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 UCK1Q9HA47 277 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 C14orf105Q9NVL8 296 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 NUP50Q9UKX7 468 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 ING4Q9UNL4 249 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 IER3IP1Q9Y5U9 82 aa20.06■□□□□ 0.8
TPM4-201ENST00000300933 ZDBF2Q9HCK1 2354 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 DAPL1A0PJW8 107 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 IRGMA1A4Y4 181 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 HIST1H1CP16403 213 aaKnown RBP20.05■□□□□ 0.8
TPM4-201ENST00000300933 SLC37A1P57057 533 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 HSD11B2P80365 405 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 GPR176Q14439 515 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 ULK3Q6PHR2 472 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 NEIL3Q8TAT5 605 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 ZMYND19Q96E35 227 aaPredicted RBP20.05■□□□□ 0.8
TPM4-201ENST00000300933 KLHL1Q9NR64 748 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 POLHQ9Y253 713 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 FREM2Q5SZK8 3169 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 H3BMH7 237 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 SYPP08247 313 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 GABRA5P31644 462 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 SLC51BQ86UW2 128 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 C7orf57Q8NEG2 295 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 OR11H4Q8NGC9 324 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 ZNRF4Q8WWF5 429 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 ZNF426Q9BUY5 554 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 ELF5Q9UKW6 265 aaPredicted RBP20.05■□□□□ 0.8
TPM4-201ENST00000300933 EML5Q05BV3 1969 aa20.05■□□□□ 0.8
TPM4-201ENST00000300933 RIIAD1A6NNX1 92 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 FAM171A2A8MVW0 826 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 H0YIG0 161 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 SSTR2P30874 369 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 RPL4P36578 427 aaKnown RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 AFF3P51826 1226 aaKnown RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 FAM27D1Q5T7N8 215 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 LYPD4Q6UWN0 246 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 FAM98AQ8NCA5 519 aaKnown RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 DPYSL5Q9BPU6 564 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 ZNF224Q9NZL3 707 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 EXTL2Q9UBQ6 330 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 COLQQ9Y215 455 aaPredicted RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 TMEM5Q9Y2B1 443 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 TEX51A0A1B0GUA7 166 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 J3QRE1 110 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 WISP1O95388 367 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 GIMD1P0DJR0 217 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 ELK1P19419 428 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 NSDHLQ15738 373 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 IL20RBQ6UXL0 311 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 RTL4Q6ZR62 310 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 SSX6Q7RTT6 188 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 TMPRSS9Q7Z410 1059 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 CDH24Q86UP0 819 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 CREB3L1Q96BA8 519 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 GPR137Q96N19 417 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 DPCDQ9BVM2 203 aaPredicted RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 CDCP1Q9H5V8 836 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 C12orf4Q9NQ89 552 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 GMEB2Q9UKD1 530 aa20.04■□□□□ 0.8
TPM4-201ENST00000300933 ZNF346Q9UL40 294 aaKnown RBP20.04■□□□□ 0.8
TPM4-201ENST00000300933 IGHV3-20A0A0C4DH32 117 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 FITM1A5D6W6 292 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ATF4P18848 351 aaPredicted RBP20.03■□□□□ 0.8
TPM4-201ENST00000300933 CXCL12P48061 93 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ANGPT1Q15389 498 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ZNF550Q7Z398 422 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 GID4Q8IVV7 300 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 C10orf53Q8N6V4 93 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 OR11H7Q8NGC8 314 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ZPLD1Q8TCW7 415 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 WNT16Q9UBV4 365 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 SLC35A3Q9Y2D2 325 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 LINC00862A6NCI5 91 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 J3QLW9 94 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 GABRPO00591 440 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ZNF19P17023 458 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ARL9Q6T311 187 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 KRT74Q7RTS7 529 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 C3orf49Q96BT1 292 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 ZFP64Q9NPA5 681 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 MKL2Q9ULH7 1088 aa20.03■□□□□ 0.8
TPM4-201ENST00000300933 BLOC1S5-TXNDC5H3BN57 136 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 KHNYNO15037 678 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms