RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SCPEP1Q9HB40 452 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 IL21RQ9HBE5 538 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 NCDNQ9UBB6 729 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ABT1Q9ULW3 272 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 CLEC3AO75596 197 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 WASP42768 502 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 SNRPNP63162 240 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 MAT1AQ00266 395 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 IKZF1Q13422 519 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 EXOSC7Q15024 291 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 SCGB2B2Q4G0G5 96 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ASPGQ86U10 573 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 SFXN5Q8TD22 340 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 CPNE2Q96FN4 548 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 SLITRK2Q9H156 845 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TMEM231Q9H6L2 316 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TMEM27Q9HBJ8 222 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 MEPEQ9NQ76 525 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 EXOSC3Q9NQT5 275 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 INPP5EQ9NRR6 644 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 FBXO4Q9UKT5 387 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 LHX6Q9UPM6 363 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 FARSAQ9Y285 508 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TCF20Q9UGU0 1960 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 A0A1B0GW55 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ANKRD20A5PA0PJZ0 165 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 PAPLNO95428 1278 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L2P0CJ85 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L3P0CJ86 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L4P0CJ87 422 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L5P0CJ88 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L6P0CJ89 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4L7P0CJ90 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 PVALBP20472 110 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 UBE2IP63279 158 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 PRDX1Q06830 199 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 BEST3Q8N1M1 668 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 NR4A3Q92570 626 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 INSM2Q96T92 566 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 PRDM7Q9NQW5 492 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 C2orf42Q9NWW7 574 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUX4Q9UBX2 424 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 APOBEC3BQ9UH17 382 aaKnown RBP13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DUXAA6NLW8 204 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 LDB3O75112 727 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 ZFPL1O95159 310 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 RPS11P62280 158 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 NNATQ16517 81 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 PWWP2BQ6NUJ5 590 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 HSD17B13Q7Z5P4 300 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 SDF2Q99470 211 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 EMC3Q9P0I2 261 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 PLEKHA6Q9Y2H5 1048 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 M0QYG6 137 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 NDUFA2O43678 99 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 DNAJB6O75190 326 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 ITGA10O75578 1167 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 FLI1Q01543 452 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 MLC1Q15049 377 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 UNQ6126/PRO20091Q6UXV3 157 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 OVCH1Q7RTY7 1134 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 SFTPA1Q8IWL2 248 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 SDR16C5Q8N3Y7 309 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 RASD2Q96D21 266 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 LMF1Q96S06 567 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 DNAH14Q0VDD8 3507 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 KANTRA0A1W2PQU2 76 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 DPP4P27487 766 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 CBX5P45973 191 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 NANOS3P60323 173 aaKnown RBP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF658BQ4V348 819 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-201ENST00000300527 GLB1L2Q8IW92 636 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 NRSN1Q8IZ57 195 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 OR51D1Q8NGF3 324 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 OR2A1Q8NGT9 310 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 PBX4Q9BYU1 374 aa13.47□□□□□ -0.25
COL6A2-201ENST00000300527 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 TVP23AA6NH52 213 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 GMFGO60234 142 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 WDPCPO95876 746 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 APEHP13798 732 aaKnown RBP13.46□□□□□ -0.25
COL6A2-201ENST00000300527 CBR1P16152 277 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 SLC6A6P31641 620 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 CENPAP49450 140 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
COL6A2-201ENST00000300527 LTBQ06643 244 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 EIPR1Q53HC9 387 aa13.46□□□□□ -0.25
COL6A2-201ENST00000300527 B3GNTL1Q67FW5 361 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms