RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PDXPQ96GD0 296 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 HIF1ANQ9NWT6 349 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 CHATP28329 748 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 GJA4P35212 333 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 P2RX3P56373 397 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 PFN3P60673 137 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 HTR3DQ70Z44 454 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 TMEM179BQ7Z7N9 219 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 TMEM102Q8N9M5 508 aaPredicted RBP14.33□□□□□ -0.12
FNDC1-201ENST00000297267 OR13C9Q8NGT0 318 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 CCL4L1Q8NHW4 92 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 TMEM231Q9H6L2 316 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 PRSS16Q9NQE7 514 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 ATG4BQ9Y4P1 393 aa14.33□□□□□ -0.12
FNDC1-201ENST00000297267 FAM221AA4D161 298 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 SCO1O75880 301 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 CHRNB1P11230 501 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 NR2C1P13056 603 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ETV1P50549 477 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 IKZF1Q13422 519 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 CTU2Q2VPK5 515 aaKnown RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 PTDSS2Q9BVG9 487 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ENKD1Q9H0I2 346 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 PCDHB16Q9NRJ7 776 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 PCDHGA5Q9Y5G8 931 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 WASH4PA8MWX3 477 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 PRAMEF26H0Y7S4 382 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 CST9Q5W186 159 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 NECAP1Q8NC96 275 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 HPSE2Q8WWQ2 592 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 LIN37Q96GY3 246 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 NRG2O14511 850 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 PCBP3P57721 371 aaKnown RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 HTD2P86397 168 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 TSSK4Q6SA08 328 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 LIN7BQ9HAP6 207 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 SCRG1O75711 98 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 SERPINE2P07093 398 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 GCH1P30793 250 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 LIPAP38571 399 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 Q6ZSR9 355 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 SIAH3Q8IW03 269 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 SGPP1Q9BX95 441 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 TSPAN10Q9H1Z9 355 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 OR10A5Q9H207 317 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 OR10A2Q9H208 303 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 BIN3Q9NQY0 253 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ING1Q9UK53 422 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 OR5K4A6NMS3 321 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 UTS2O95399 124 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ELAVL4P26378 380 aaKnown RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 DNAJC22Q8N4W6 341 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 C11orf54Q9H0W9 315 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ARNT2Q9HBZ2 717 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
FNDC1-201ENST00000297267 CHST2Q9Y4C5 530 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 TOPAZ1Q8N9V7 1692 aa14.32□□□□□ -0.12
FNDC1-201ENST00000297267 NSA2O95478 260 aaKnown RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 CRABP1P29762 137 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ERP29P30040 261 aaKnown RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 CD6P30203 668 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ACTBP60709 375 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ACTG1P63261 375 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 LYSMD4Q5XG99 296 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 IDO2Q6ZQW0 420 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 NKAIN4Q8IVV8 208 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 OR4M1Q8NGD0 313 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 BABAM2Q9NXR7 383 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 HSPE1-MOB4S4R3N1 261 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ITGB4P16144 1822 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 TRIM23P36406 574 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 NPY4RP50391 375 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 PARM1Q6UWI2 310 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 Q7L0L9 218 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 GDF7Q7Z4P5 450 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 OR5H6Q8NGV6 325 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 FNDC9Q8TBE3 224 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ARID1BQ8NFD5 2236 aaPredicted RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 HHLA1C9JL84 531 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 AKR7A3O95154 331 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 FURINP09958 794 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 EDDM3AQ14507 147 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 MRPL43Q8N983 215 aaKnown RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 C19orf47Q8N9M1 422 aaKnown RBP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 SLC41A2Q96JW4 573 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 PKDCCQ504Y2 493 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 FRMPD2BQ6IN97 320 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ZNF440Q8IYI8 595 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 ADAMTS18Q8TE60 1221 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 THRSPQ92748 146 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 CHST8Q9H2A9 424 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.31□□□□□ -0.12
FNDC1-201ENST00000297267 NME7Q9Y5B8 376 aa14.31□□□□□ -0.12
FNDC1-201ENST00000297267 SYPP08247 313 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms