RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DNASE2BQ8WZ79 361 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 FRZBQ92765 325 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 NEIL2Q969S2 332 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DTD2Q96FN9 168 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 C11orf54Q9H0W9 315 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 KLHL13Q9P2N7 655 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 MIA3Q5JRA6 1907 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SHISA7A6NL88 538 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 FRS3O43559 492 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 MT-CO2P00403 227 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 LALBAP00709 142 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 UBL4AP11441 157 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 AHRP35869 848 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SELENOVP59797 346 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SHC2P98077 582 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SORDQ00796 357 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 LCN10Q6JVE6 187 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 LYPD4Q6UWN0 246 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 BPIFB2Q8N4F0 458 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 IL17RDQ8NFM7 739 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR4M1Q8NGD0 313 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR5L2Q8NGL0 311 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERINC2Q96SA4 455 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 NICN1Q9BSH3 213 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 HRH4Q9H3N8 390 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 PLEKHA3Q9HB20 300 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC35A3Q9Y2D2 325 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DENND4CQ5VZ89 1909 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPS10-NUDT3A0A1W2PQS6 291 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 POM121CA8CG34 1229 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DPM1O60762 260 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAB3AP20336 220 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC1A3P43003 542 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPS10P46783 165 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 PPP2CBP62714 309 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 PPP2CAP67775 309 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ILKQ13418 452 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 NFATC4Q14934 902 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 FCN2Q15485 313 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC5A12Q1EHB4 618 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ADPRMQ3LIE5 342 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR5T1Q8NG75 326 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR4F15Q8NGB8 312 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR10K1Q8NGX5 313 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 RBPMSQ93062 196 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ACSS1Q9NUB1 689 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 KCNIP1Q9NZI2 227 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 REV1Q9UBZ9 1251 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DIMT1Q9UNQ2 313 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 CNTRLQ7Z7A1 2325 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 URB1O60287 2271 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 DVL2O14641 736 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SYNGR4O95473 234 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 GDNFP39905 211 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF136P52737 540 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 BTG1P62324 171 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 LTBQ06643 244 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 P2RY14Q15391 338 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FIGLAQ6QHK4 219 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM122BQ7Z309 247 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 DNTTIP1Q9H147 329 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 NTN4Q9HB63 628 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 PILRBQ9UKJ0 227 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC22A7Q9Y694 548 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 A8MXE2 369 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TCRBP04435 133 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERPINE2P07093 398 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 IL1RNP18510 177 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 PSMB10P40306 273 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAB31Q13636 194 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERTAD2Q14140 314 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 EIF2B1Q14232 305 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 MAVSQ7Z434 540 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 PGBD5Q8N414 524 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 DUSP19Q8WTR2 217 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 ELF4Q99607 663 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TM7SF3Q9NS93 570 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF225Q9UK10 706 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TIMM8BQ9Y5J9 83 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMEM82A0PJX8 343 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC22A23A1A5C7 686 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 PROB1E7EW31 1015 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FADS1O60427 444 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SDC3O75056 442 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 IL33O95760 270 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 CD160O95971 181 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 KIAA1024LP59773 190 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 CARD17Q5XLA6 110 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FCRLBQ6BAA4 426 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC23A3Q6PIS1 610 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 Q6ZPB1 254 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 TTLL10Q6ZVT0 673 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FCRLAQ7L513 359 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms