RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 MAP3K8P41279 467 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 LIMS1P48059 325 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 DNASE1L1P49184 302 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 ADAM8P78325 824 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 POU3F1Q03052 451 aaPredicted RBP8.23□□□□□ -1.09
SEC16A-201ENST00000277537 PRKCDQ05655 676 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 POU4F2Q12837 409 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 FGFBP1Q14512 234 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 COL28A1Q2UY09 1125 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 THOC7Q6I9Y2 204 aaKnown RBP8.23□□□□□ -1.09
SEC16A-201ENST00000277537 TCEAL6Q6IPX3 200 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 ZNF322Q6U7Q0 402 aaPredicted RBP8.23□□□□□ -1.09
SEC16A-201ENST00000277537 SYT9Q86SS6 491 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 IL22RA1Q8N6P7 574 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 C1orf216Q8TAB5 229 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 TCEAL3Q969E4 200 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 PDCD1LG2Q9BQ51 273 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 HCAR1Q9BXC0 346 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 STRADBQ9C0K7 418 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 MEPEQ9NQ76 525 aaPredicted RBP8.23□□□□□ -1.09
SEC16A-201ENST00000277537 DKKL1Q9UK85 242 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 PLXND1Q9Y4D7 1925 aa8.23□□□□□ -1.09
SEC16A-201ENST00000277537 TMEM265A0A087WTH1 108 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 KDM4EB2RXH2 506 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ZNF879B4DU55 563 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 HRO43593 1189 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 OR7A10O76100 309 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 RECKO95980 971 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ABCD3P28288 659 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ANGPT1Q15389 498 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 SF3B4Q15427 424 aaKnown RBP eCLIP8.22□□□□□ -1.091e-6■■■■■ 29
SEC16A-201ENST00000277537 SSX1Q16384 188 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 FAM27D1Q5T7N8 215 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 PTPMT1Q8WUK0 201 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 DOK1Q99704 481 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 WWTR1Q9GZV5 400 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CKLFQ9UBR5 152 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ING1Q9UK53 422 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ACAD8Q9UKU7 415 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 DNAJC13O75165 2243 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 LRRK1Q38SD2 2015 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ACOD1A6NK06 481 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ITGA10O75578 1167 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 UPK1BO75841 260 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CD2P06729 351 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CD14P08571 375 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 GABRA5P31644 462 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CSF2RBP32927 897 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 TGFBR2P37173 567 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ACTA2P62736 377 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ACTG2P63267 376 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 SGCBQ16585 318 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 HES5Q5TA89 166 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 VASNQ6EMK4 673 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CNIH2Q6PI25 160 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CADM3Q8N126 398 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 GPR119Q8TDV5 335 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 C3orf49Q96BT1 292 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 PRRG4Q9BZD6 226 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 DUSP15Q9H1R2 295 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 PTPRSQ13332 1948 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 PLXNA2O75051 1894 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 NSG1A0A0A6YYJ2 146 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 TEX51A0A1B0GUA7 166 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 C17orf51A8MQB3 221 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 TGFBR3LH3BV60 316 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 OR2J2O76002 312 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ENDOUP21128 410 aaKnown RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 RNF4P78317 190 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 FABP5Q01469 135 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 TOMM34Q15785 309 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 C1orf210Q8IVY1 113 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 CMIPQ8IY22 773 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 PM20D2Q8IYS1 436 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 OR13C5Q8NGS8 318 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 KTI12Q96EK9 354 aaPredicted RBP8.22□□□□□ -1.09
SEC16A-201ENST00000277537 BEX1Q9HBH7 125 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 HPF1Q9NWY4 346 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 RASD1Q9Y272 281 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 ANKRD61A6NGH8 418 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 RFPL3O75679 317 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 LIMS3P0CW19 117 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 LIMS4P0CW20 117 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 RAB3BP20337 219 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 S100A1P23297 94 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 FOLR3P41439 243 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 SLC6A9P48067 706 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 HYAL4Q2M3T9 481 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 EEF1A1P5Q5VTE0 462 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 C1QL3Q5VWW1 255 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 STEAP3Q658P3 488 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 BICRALQ6AI39 1079 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 DPY19L2P2Q6ZN68 376 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 SERPINA12Q8IW75 414 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 MS4A15Q8N5U1 240 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 OR1N1Q8NGS0 311 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 OR2AJ1Q8NGZ0 328 aa8.22□□□□□ -1.09
SEC16A-201ENST00000277537 BRIX1Q8TDN6 353 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms