RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TAS2R16Q9NYV7 291 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 RPS6KB2Q9UBS0 482 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 RNF115Q9Y4L5 304 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 A0A0B4J2E0 115 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 A0A1B0GX12 115 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 A0A1W2PR80 420 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 PRORSD1PA6NEY8 169 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 H7C1Q1 480 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 M0QX08 132 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 M0R3H8 397 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 CLOCKO15516 846 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 AHSA1O95433 338 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 CD3EP07766 207 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 SOD3P08294 240 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 INHBBP09529 407 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 PNMTP11086 282 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 CRYBA2P53672 197 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 RGS8P57771 180 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 EPHX4Q8IUS5 362 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 KDM8Q8N371 416 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 OR52N5Q8NH56 324 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 SLC25A36Q96CQ1 311 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 TRIM2Q9C040 744 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 PIF1Q9H611 641 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 ESRP2Q9H6T0 727 aaKnown RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 PARPBPQ9NWS1 579 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 TESQ9UGI8 421 aaKnown RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 SLC25A15Q9Y619 301 aa12.68□□□□□ -0.38
HMGN3-201ENST00000275036 ANK3Q12955 4377 aaKnown RBP12.68□□□□□ -0.38
HMGN3-201ENST00000275036 CIB4A0PJX0 185 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 CCT8L1PA6NM43 557 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 ARHGEF9O43307 516 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 SERPINB7O75635 380 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 LGI1O95970 557 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 DANCRP0C864 163 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 PAX1P15863 534 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 CD247P20963 164 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 PTNP21246 168 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 PCGF2P35227 344 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 SELENOPP49908 381 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 NPTX1Q15818 432 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 NRF1Q16656 503 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 ALG10BQ5I7T1 473 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 FAM91A1Q658Y4 838 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 REP15Q6BDI9 236 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 PRSS57Q6UWY2 283 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 TSPYL5Q86VY4 417 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-201ENST00000275036 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 RBM45Q8IUH3 476 aaKnown RBP12.67□□□□□ -0.38
HMGN3-201ENST00000275036 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 BHLHE22Q8NFJ8 381 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-201ENST00000275036 OR4D11Q8NGI4 311 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 DNAJA4Q8WW22 397 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-201ENST00000275036 SLC38A4Q969I6 547 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 TAMM41Q96BW9 452 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 LRRC58Q96CX6 371 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-201ENST00000275036 B3GAT1Q9P2W7 334 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
HMGN3-201ENST00000275036 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
HMGN3-201ENST00000275036 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 A0A087WUJ7 227 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 VAMP5O95183 116 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 CBLP22681 906 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 CDH12P55289 794 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 NCALDP61601 193 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 LTBQ06643 244 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 PGGHGQ32M88 737 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF672Q499Z4 452 aaPredicted RBP12.66□□□□□ -0.38
HMGN3-201ENST00000275036 FAM69AQ5T7M9 428 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 CALHM3Q86XJ0 350 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 OR6T1Q8NGN1 323 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 SLC47A1Q96FL8 570 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms