RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 CD53P19397 219 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TAF9Q16594 264 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR2G6Q5TZ20 316 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SHEQ5VZ18 495 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 RBMXL3Q8N7X1 1067 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 DMBX1Q8NFW5 382 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 RTP3Q9BQQ7 232 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TREX1Q9NSU2 369 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 NPIPA5A0A0B4J1W7 369 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 A6NIN4 97 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 NPIPA7E9PJI5 369 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 FRS3O43559 492 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 TRAF3IP2O43734 574 aaPredicted RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 CBX7O95931 251 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 NPIPA8P0DM63 369 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 OR7E24Q6IFN5 339 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 DPPA4Q7L190 304 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 IL22RA1Q8N6P7 574 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 CELF2-AS1Q8N7Q2 184 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 RPL3LQ92901 407 aaKnown RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SFXN1Q9H9B4 322 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 UBQLN4Q9NRR5 601 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 NENFQ9UMX5 172 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 NCR1O76036 304 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF133P52736 654 aaPredicted RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ASAH1Q13510 395 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ADGRE4PQ86SQ3 457 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 OR5M8Q8NGP6 311 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC6A18Q96N87 628 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 VN1R3Q9BXE9 311 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 C8orf33Q9H7E9 229 aaPredicted RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 C5AR2Q9P296 337 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 RAB22AQ9UL26 194 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 EMCNQ9ULC0 261 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 OSGIN2Q9Y236 505 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 C7orf72A4D263 438 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 H3BML4 177 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 HTR1FP30939 366 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 CSNK1DP48730 415 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ERVFC1P60507 584 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 RPE65Q16518 533 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 C11orf91Q3C1V1 193 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 MBOAT2Q6ZWT7 520 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 GTF2H5Q6ZYL4 71 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 PBX4Q9BYU1 374 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 CLDN1O95832 211 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 FABP1P07148 127 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 XCR1P46094 333 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 DAPP51397 102 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC7A9P82251 487 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF239Q16600 458 aaKnown RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 KDF1Q8NAX2 398 aaPredicted RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 OR52R1Q8NGF1 315 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 DOK4Q8TEW6 326 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ASB13Q8WXK3 278 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC39A13Q96H72 371 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SPHK1Q9NYA1 384 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SETD1AO15047 1707 aaKnown RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 PLSCR5A0PG75 271 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 TRABD2BA6NFA1 517 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC9B1P1A6NJY1 282 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SYT5O00445 386 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 HPNP05981 417 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 DTYMKP23919 212 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 APEX1P27695 318 aaKnown RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SFTPDP35247 375 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF140P52738 457 aaPredicted RBP8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 PGGT1BP53609 377 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 ADPRMQ3LIE5 342 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SEC22AQ96IW7 307 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 WDR76Q9H967 626 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SCPEP1Q9HB40 452 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SNED1Q8TER0 1413 aa8.11□□□□□ -1.11
SCUBE3-201ENST00000274938 SOCS6O14544 535 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF217O75362 1048 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 PNPP00491 289 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 CPMP14384 443 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 GM2AP17900 193 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 ACKR3P25106 362 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 EEF1A1P68104 462 aaKnown RBP8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC35D3Q5M8T2 416 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 VASNQ6EMK4 673 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 DPPA2Q7Z7J5 298 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 OR5AR1Q8NGP9 310 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 NEIL2Q969S2 332 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 YTHDF2Q9Y5A9 579 aaKnown RBP8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 FCGR2AP12318 317 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 KCNJ10P78508 379 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 C1orf61Q13536 156 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 CCL14Q16627 93 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 SMN1Q16637 294 aaKnown RBP8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 FAM57BQ71RH2 274 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 MISPQ8IVT2 679 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 ST8SIA4Q92187 359 aa8.1□□□□□ -1.11
SCUBE3-201ENST00000274938 GHSRQ92847 366 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms