RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 GAREM1Q9H706 876 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 KCNJ16Q9NPI9 418 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 SIDT1Q9NXL6 827 aaKnown RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 DPM1O60762 260 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PRKAR1BP31321 381 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 OR1D5P58170 312 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 DCAF7P61962 342 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SORDQ00796 357 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 MEF2DQ14814 521 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 GGTA1PQ4G0N0 100 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PARM1Q6UWI2 310 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF808Q8N4W9 903 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 OR5M11Q96RB7 305 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 UNKLQ9H9P5 680 aaKnown RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 NOX4Q9NPH5 578 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 SLC22A7Q9Y694 548 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PRAF2O60831 178 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SLC43A1O75387 559 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 MT-CO2P00403 227 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 NPPBP16860 134 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 NUDT1P36639 197 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 TAS2R19P59542 299 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PFN3P60673 137 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 NRARPQ7Z6K4 114 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 MARCH3Q86UD3 253 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 CCDC71Q8IV32 467 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 GIMAP1Q8WWP7 306 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 EDAQ92838 391 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SNX18Q96RF0 628 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 MRI1Q9BV20 369 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 FAM234AQ9H0X4 552 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 C1orf198Q9H425 327 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 GALNT9Q9HCQ5 603 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 HSFX1Q9UBD0 423 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF223Q9UK11 482 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 EMC9Q9Y3B6 208 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 NME7Q9Y5B8 376 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 LINC01553A4QN01 128 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 FAM155AB1AL88 458 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 GFRA2O00451 464 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 STK17BO94768 372 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 TMEM207Q6UWW9 146 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 BATF2Q8N1L9 274 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 FOXRED1Q96CU9 486 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF225Q9UK10 706 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 DNAJB6O75190 326 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 IL1AP01583 271 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 TP53P04637 393 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 ITGB2P05107 769 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 PGFP49763 221 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 AFF3P51826 1226 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 RPL23AP62750 156 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 CSNK1G2P78368 415 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 IKZF1Q13422 519 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 SLC36A2Q495M3 483 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 SFRP5Q5T4F7 317 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 ZNF546Q86UE3 836 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 L3MBTL4Q8NA19 623 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 OR5M1Q8NGP8 315 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 MIB2Q96AX9 1013 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 MUCL1Q96DR8 90 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 P2RY10O00398 339 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 RPA2P15927 270 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 DPP4P27487 766 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 SSR4P51571 173 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 PCBD1P61457 104 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 SSX2Q16385 188 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 MBOAT2Q6ZWT7 520 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 PRICKLE2Q7Z3G6 844 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 METTL17Q9H7H0 456 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 RANGRFQ9HD47 186 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 INPP5EQ9NRR6 644 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 NOSIPQ9Y314 301 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 C1orf196B1AJZ1 125 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 IGHV3-9P01782 118 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 MRPS10P82664 201 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 RBM45Q8IUH3 476 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 ASB17Q8WXJ9 295 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 MALSU1Q96EH3 234 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 LCORQ96JN0 433 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 UTP23Q9BRU9 249 aaKnown RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 PGAP2Q9UHJ9 254 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 FBXL2Q9UKC9 423 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 TRAPPC2LQ9UL33 140 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 ZNF701M0R085 212 aaPredicted RBP10.62□□□□□ -0.71
USP53-201ENST00000274030 TK1P04183 234 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 REEP5Q00765 189 aa10.62□□□□□ -0.71
USP53-201ENST00000274030 FUNDC1Q8IVP5 155 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms