RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TTC9Q92623 222 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 TCEAL3Q969E4 200 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ULBP3Q9BZM4 244 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 AKIRIN1Q9H9L7 192 aaPredicted RBP13.93□□□□□ -0.18
SF3B4-201ENST00000271628 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 APEHP13798 732 aaKnown RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 HIST1H1CP16403 213 aaKnown RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 SLC2A5P22732 501 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 CCDC92Q53HC0 331 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 XKRXQ6PP77 449 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 FAM98AQ8NCA5 519 aaKnown RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 MR1Q95460 341 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 KISS1RQ969F8 398 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF486Q96H40 463 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 KCTD7Q96MP8 289 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 TPK1Q9H3S4 243 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 SLC39A1Q9NY26 324 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 LOC102723996A0A087X1L8 192 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 LNP1A1A4G5 178 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 TMEM200CA6NKL6 621 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 C12orf71A8MTZ7 269 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 SLC30A4O14863 429 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 GDF9O60383 454 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 HIST1H2ABP04908 130 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 CD63P08962 238 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 IL7P13232 177 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 BDH1Q02338 343 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 LGALS3BPQ08380 585 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 GLYR1Q49A26 553 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 RSBN1Q5VWQ0 802 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 SPATC1Q76KD6 591 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 HIST3H2AQ7L7L0 130 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 LSRQ86X29 649 aaPredicted RBP13.92□□□□□ -0.18
SF3B4-201ENST00000271628 CYB561A3Q8NBI2 242 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 GPR119Q8TDV5 335 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 AP3S1Q92572 193 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 HIST1H2ACQ93077 130 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 C8orf44Q96CB5 159 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 MESP1Q9BRJ9 268 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 FKRPQ9H9S5 495 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 NEK6Q9HC98 313 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 WDR70Q9NW82 654 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 MYOTQ9UBF9 498 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 GSTK1Q9Y2Q3 226 aa13.92□□□□□ -0.18
SF3B4-201ENST00000271628 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 DAPL1A0PJW8 107 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 CCDC182A6NF36 153 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 IMPA2O14732 288 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 PLD2O14939 933 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SEC14L5O43304 696 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SBK2P0C263 348 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 GABRA5P31644 462 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 CAPZA2P47755 286 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 GALEQ14376 348 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 QPRTQ15274 297 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 TOMM34Q15785 309 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 BAK1Q16611 211 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ALG10Q5BKT4 473 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 FAM199XQ6PEV8 388 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 C5orf46Q6UWT4 87 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 C16orf47Q6ZP98 133 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 GRINAQ7Z429 371 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 RAB43Q86YS6 212 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 GDPD1Q8N9F7 314 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SDR9C7Q8NEX9 313 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 OR6F1Q8NGZ6 308 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 OR4K13Q8NH42 304 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SLC22A8Q8TCC7 542 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF524Q96C55 264 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 KTI12Q96EK9 354 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 TAS2R10Q9NYW0 307 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 PLEKHB1Q9UF11 243 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF221Q9UK13 617 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 PCDHGB7Q9Y5F8 929 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SSX4O60224 188 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 GMFGO60234 142 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 CD14P08571 375 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 FGF9P31371 208 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 RPS5P46782 204 aaKnown RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 RFX2P48378 723 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SUMO3P55854 103 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 FBXW4P57775 412 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ACTC1P68032 377 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ACTA1P68133 377 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SLC35D3Q5M8T2 416 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 DCAF12Q5T6F0 453 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 DDI2Q5TDH0 399 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 C22orf42Q6IC83 251 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF322Q6U7Q0 402 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SPRYD4Q8WW59 207 aaPredicted RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 HGDQ93099 445 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms